RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA206070" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJNA206070 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2917270 2917270 PRJNA206070_S_NODE_563_length_9489_cov_27.792319_g225_i0 PRJNA206070 563 9489 27.792319 2637.21314991 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 502 1.46e-144   NR MBV9266765.1 2052142 g225 i0 31.3 0.456844767625672 1445 790 43 51 8744 4668 39 1367 MBV9266765.1 hypothetical protein [Acidobacteriaceae bacterium] diamond 4335 502 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium
11845187 11845187 PRJNA206070_S_NODE_590_length_9241_cov_23.118427_g225_i1 PRJNA206070 590 9241 23.118427 2136.37383907 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 502 1.3999999999999994e-144   NR MBV9266765.1 2052142 g225 i1 31.3 0.469105075208311 1445 790 44.1 51 8584 4508 39 1367 MBV9266765.1 hypothetical protein [Acidobacteriaceae bacterium] diamond 4335 502 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium
24592839 24592839 PRJNA206070_S_NODE_5440_length_681_cov_68.972050_g3644_i0 PRJNA206070 5440 681 68.97205 469.6996605 Terriglobales bacterium 2282142 Bacteria Bacteria 392 1.16e-132   NR HEY4959407.1 2282142 g3644 i0 87.1 0.991189427312775 225 29 99.1 0 6 680 30 254 HEY4959407.1 group II intron reverse transcriptase/maturase [Terriglobales bacterium] diamond 675 392 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
27516330 27516330 PRJNA206070_S_NODE_30663_length_152_cov_3.704348_g28787_i0 PRJNA206070 30663 152 3.704348 5.63060896 Candidatus Sulfotelmatobacter sp. 2771375 Bacteria Bacteria 42.4 0.0148   NR HVH59780.1 2771375 g28787 i0 45.7 0.907894736842105 46 24 88.8 1 18 152 154 199 HVH59780.1 hypothetical protein [Candidatus Sulfotelmatobacter sp.] diamond 138 42.4 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Candidatus Korobacteraceae Candidatus Sulfotelmatobacter Candidatus Sulfotelmatobacter sp.
27706172 27706172 PRJNA206070_S_NODE_9004_length_418_cov_3.803150_g7131_i0 PRJNA206070 9004 418 3.80315 15.897167 Acidobacteriota bacterium 1978231 Bacteria Bacteria 47 0.00813   NR MBE3072480.1 1978231 g7131 i0 55 0.287081339712919 40 18 28.7 0 129 10 866 905 MBE3072480.1 PKD domain-containing protein [Acidobacteriota bacterium] diamond 120 47 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29221527 29221527 PRJNA206070_S_NODE_30189_length_154_cov_1.051282_g28313_i0 PRJNA206070 30189 154 1.051282 1.61897428 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 42 0.0123   NR HEY7306840.1 2212468 g28313 i0 47.5 2.35714285714286 40 21 77.9 0 152 33 101 140 HEY7306840.1 hypothetical protein [Bryobacteraceae bacterium] diamond 363 42 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
30769146 30769146 PRJNA206070_S_NODE_12914_length_304_cov_2.752809_g11038_i0 PRJNA206070 12914 304 2.752809 8.36853936 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 58.9 1.13e-7   NR MFN2406749.1 2283092 g11038 i0 39 0.809210526315789 82 50 80.9 0 252 7 167 248 MFN2406749.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 246 58.9 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;