contig_metadata
4 rows where analysis = "diamond", bioproject = "PRJNA206070" and tax_clade = "PVC group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9294449 | 9294449 | PRJNA206070_S_NODE_22248_length_189_cov_1.789474_g20372_i0 | PRJNA206070 | 22248 | 189 | 1.789474 | 3.38210586 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 83.6 | 1.07e-17 | NR | HZV04970.1 | 2052164 | g20372 | i0 | 64.5 | 3.82539682539683 | 62 | 22 | 98.4 | 0 | 187 | 2 | 160 | 221 | HZV04970.1 class II aldolase/adducin family protein [Gemmataceae bacterium] | diamond | 723 | 83.6 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmataceae bacterium | ||
| 27358610 | 27358610 | PRJNA206070_S_NODE_23223_length_183_cov_1.746575_g21347_i0 | PRJNA206070 | 23223 | 183 | 1.746575 | 3.19623225 | Prosthecobacter sp. | 1965333 | Bacteria | Bacteria | 57 | 1.92e-8 | NR | WP_395739302.1 | 1965333 | g21347 | i0 | 58.3 | 0.983606557377049 | 60 | 24 | 98.4 | 1 | 180 | 1 | 59 | 117 | WP_395739302.1 hypothetical protein [Prosthecobacter sp.] | diamond | 180 | 57 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter sp. | |
| 31102651 | 31102651 | PRJNA206070_S_NODE_19395_length_211_cov_3.775862_g17519_i0 | PRJNA206070 | 19395 | 211 | 3.775862 | 7.96706882 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 84 | 5.88e-17 | NR | WP_020469806.1 | 360055 | g17519 | i0 | 58 | 2.80094786729858 | 69 | 29 | 98.1 | 0 | 3 | 209 | 152 | 220 | WP_020469806.1 hypothetical protein [Zavarzinella formosa] | diamond | 591 | 84 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Zavarzinella | Zavarzinella formosa | |
| 31861640 | 31861640 | PRJNA206070_S_NODE_5317_length_697_cov_3.309091_g3530_i0 | PRJNA206070 | 5317 | 697 | 3.309091 | 23.06436427 | Bacteria | 2 | Bacteria | Bacteria | 156 | 3.269999999999999e-42 | NR | MCR5183256.1 | 2026772 | g3530 | i0 | 50 | 4.63988522238164 | 154 | 60 | 61.1 | 4 | 5 | 430 | 186 | 334 | MCR5183256.1 adenine-specific methyltransferase EcoRI family protein [Opitutales bacterium] | diamond | 3234 | 157 | 0.993630573248408 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutales bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;