RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

5 rows where analysis = "diamond", bioproject = "PRJNA195897" and tax_phylum = "Cercozoa"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA195897 · 5 ✖

analysis 1

  • diamond · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2916687 2916687 PRJNA195897_P_NODE_6203_length_197_cov_1.405405_g6170_i0 PRJNA195897 6203 197 1.405405 2.76864785 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 132 1.75e-34   NR MES1916167.1 1215613 g6170 i0 93.8 2.96954314720812 65 4 99 0 196 2 59 123 MES1916167.1 hypothetical protein [Cercozoa sp. M6MM] diamond 585 132 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
7433194 7433194 PRJNA195897_P_NODE_8026_length_177_cov_1.335938_g7993_i0 PRJNA195897 8026 177 1.335938 2.36461026 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 87 2.47e-18   NR MES1911769.1 1215613 g7993 i0 68.4 0.966101694915254 57 18 96.6 0 6 176 58 114 MES1911769.1 hypothetical protein [Cercozoa sp. M6MM] diamond 171 87 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
29916176 29916176 PRJNA195897_P_NODE_3551_length_257_cov_1.000000_g3518_i0 PRJNA195897 3551 257 1 2.57 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 93.6 2.67e-22   NR MES1913255.1 1215613 g3518 i0 55.3 0.88715953307393 76 34 88.7 0 233 6 47 122 MES1913255.1 hypothetical protein [Cercozoa sp. M6MM] diamond 228 93.6 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
31021854 31021854 PRJNA195897_P_NODE_7315_length_184_cov_2.022222_g7282_i0 PRJNA195897 7315 184 2.022222 3.72088848 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 85.1 2.84e-20   NR MES1911722.1 1215613 g7282 i0 72.5 0.831521739130435 51 14 83.2 0 2 154 2 52 MES1911722.1 hypothetical protein [Cercozoa sp. M6MM] diamond 153 85.1 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
32697491 32697491 PRJNA195897_P_NODE_1540_length_423_cov_1.417112_g1507_i0 PRJNA195897 1540 423 1.417112 5.99438376 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 90.5 4.82e-19   NR MES1913935.1 1215613 g1507 i0 67.1 0.539007092198582 76 25 53.9 0 18 245 138 213 MES1913935.1 hypothetical protein [Cercozoa sp. M6MM] diamond 228 90.5 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;