RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA195897" and tax_kingdom = "Nanobdellati"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_kingdom 1

  • Nanobdellati · 3 ✖

bioproject 1

  • PRJNA195897 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27547866 27547866 PRJNA195897_P_NODE_724_length_638_cov_1.718166_g694_i0 PRJNA195897 724 638 1.718166 10.96189908 Candidatus Micrarchaeota archaeon 2250274 Archaea Archaea 263 5.55e-83   NR MBU0527194.1 2250274 g694 i0 64.1 0.91692789968652 195 66 91.7 2 627 43 233 423 MBU0527194.1 ATPase [Candidatus Micrarchaeota archaeon] diamond 585 263 1 Archaea   Nanobdellati Candidatus Micrarchaeota         Candidatus Micrarchaeota archaeon
28842280 28842280 PRJNA195897_P_NODE_4568_length_224_cov_2.102857_g4535_i0 PRJNA195897 4568 224 2.102857 4.71039968 Candidatus Woesearchaeota archaeon 2026803 Archaea Archaea 115 9.58e-29   NR MBT5274674.1 2026803 g4535 i0 75.7 1.98214285714286 74 18 99.1 0 224 3 1 74 MBT5274674.1 IMP dehydrogenase [Candidatus Woesearchaeota archaeon] diamond 444 115 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon
30059998 30059998 PRJNA195897_P_NODE_3431_length_263_cov_0.971963_g3398_i0 PRJNA195897 3431 263 0.971963 2.55626269 Archaea 2157 Archaea Archaea 91.7 2.46e-19   NR MDA3855689.1 2026803 g3398 i0 46.5 3.92395437262357 86 46 98.1 0 262 5 329 414 MDA3855689.1 leucyl aminopeptidase family protein [Candidatus Woesearchaeota archaeon] diamond 1032 91.7 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;