RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA195897" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 2 ✖

bioproject 1

  • PRJNA195897 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27800641 27800641 PRJNA195897_P_NODE_10744_length_165_cov_1.844828_g10711_i0 PRJNA195897 10744 165 1.844828 3.0439662 Candidatus Methanofastidiosia archaeon 2099674 Archaea Archaea 40.8 0.0454   NR MBN1786456.1 2099674 g10711 i0 34.8 0.836363636363636 46 30 83.6 0 21 158 11 56 MBN1786456.1 CBS domain-containing protein [Candidatus Methanofastidiosia archaeon] diamond 138 40.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Candidatus Methanofastidiosia       Candidatus Methanofastidiosia archaeon
32589583 32589583 PRJNA195897_P_NODE_3359_length_266_cov_1.092166_g3326_i0 PRJNA195897 3359 266 1.092166 2.90516156 Methanolobus 2220 Archaea Archaea 42.7 0.0271   NR WP_209616198.1 38023 g3326 i0 48.8 0.924812030075188 41 19 44 1 239 123 61 101 WP_209616198.1 META domain-containing protein [Methanolobus bombayensis] diamond 246 42.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanolobus Methanolobus bombayensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;