RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA193544" and tax_phylum = "Cressdnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Cressdnaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA193544 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28179106 28179106 PRJNA193544_S_NODE_106_length_469_cov_25.029545_g93_i0 PRJNA193544 106 469 25.029545 117.38856605 Cressdnaviricota sp. 2748378 Viruses Viruses 99.8 9.04e-23   NR AWW06056.1 2748378 g93 i0 43.3 0.767590618336887 120 66 76.8 1 105 464 39 156 AWW06056.1 MAG: capsid protein [Cressdnaviricota sp.] diamond 360 99.8 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.
31337808 31337808 PRJNA193544_S_NODE_776_length_276_cov_19.866397_g761_i0 PRJNA193544 776 276 19.866397 54.83125572 Cressdnaviricota sp. 2748378 Viruses Viruses 66.6 5.34e-11   NR AWW06056.1 2748378 g761 i0 37.8 0.978260869565217 90 56 97.8 0 2 271 67 156 AWW06056.1 MAG: capsid protein [Cressdnaviricota sp.] diamond 270 66.6 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;