RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA188516" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA188516 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27136718 27136718 PRJNA188516_P_NODE_5202_length_165_cov_0.896552_g5152_i0 PRJNA188516 5202 165 0.896552 1.4793108 Chrocajirn virus 3129512 Viruses Viruses 71.2 1.06e-12   NR WZH58443.1 3129512 g5152 i0 64.8 0.981818181818182 54 19 98.2 0 3 164 106 159 WZH58443.1 MAG: maturation protein [Chrocajirn virus] diamond 162 71.2 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Chrocajirn virus
29379204 29379204 PRJNA188516_P_NODE_2829_length_204_cov_1.006452_g2779_i0 PRJNA188516 2829 204 1.006452 2.05316208 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 125 1.29e-31   NR AVM87439.1 3063761 g2779 i0 86.8 1 68 9 100 0 1 204 1231 1298 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 204 125 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2
31116341 31116341 PRJNA188516_P_NODE_3555_length_180_cov_1.106870_g3505_i0 PRJNA188516 3555 180 1.10687 1.992366 Sopoziv virus 3131673 Viruses Viruses 63.2 3.45e-10   NR WZH61775.1 3131673 g3505 i0 69 1.35 42 13 70 0 16 141 93 134 WZH61775.1 MAG: RNA-dependent RNA polymerase, partial [Sopoziv virus] diamond 243 63.2 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae   Sopoziv virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;