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contig_metadata

18 rows where analysis = "diamond", bioproject = "PRJNA188516" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 18 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA188516 · 18 ✖

analysis 1

  • diamond · 18 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11258423 11258423 PRJNA188516_P_NODE_3629_length_178_cov_1.209302_g3579_i0 PRJNA188516 3629 178 1.209302 2.15255756 Clydaea vesicula 447962 Fungi Fungi 108 7.5599999999999995e-28   NR KAJ3198918.1 447962 g3579 i0 94.9 2.98314606741573 59 3 99.4 0 2 178 59 117 KAJ3198918.1 40S ribosomal protein S9 [Clydaea vesicula] diamond 531 108 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Lobulomycetales Lobulomycetaceae Clydaea Clydaea vesicula
19491804 19491804 PRJNA188516_P_NODE_3956_length_170_cov_1.289256_g3906_i0 PRJNA188516 3956 170 1.289256 2.1917352 Chytridium lagenaria 64509 Fungi Fungi 102 4.75e-27   NR KAI8848400.1 64509 g3906 i0 83.7 3.45882352941176 49 8 86.5 0 2 148 8 56 KAI8848400.1 40S ribosomal protein S29 [Chytridium lagenaria] diamond 588 102 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Chytridium Chytridium lagenaria
20767357 20767357 PRJNA188516_P_NODE_5257_length_165_cov_0.896552_g5207_i0 PRJNA188516 5257 165 0.896552 1.4793108 Batrachochytrium salamandrivorans 1357716 Fungi Fungi 95.1 4.64e-23   NR KAH9259618.1 1357716 g5207 i0 96.1 0.927272727272727 51 2 92.7 0 155 3 1 51 KAH9259618.1 60S ribosomal protein L11 [Batrachochytrium salamandrivorans] diamond 153 95.1 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium salamandrivorans
23317916 23317916 PRJNA188516_P_NODE_3639_length_178_cov_0.829457_g3589_i0 PRJNA188516 3639 178 0.829457 1.47643346 Batrachochytrium salamandrivorans 1357716 Fungi Fungi 103 8.11e-25   NR KAH9254230.1 1357716 g3589 i0 74.6 0.99438202247191 59 15 99.4 0 177 1 80 138 KAH9254230.1 hypothetical protein BASA81_007831 [Batrachochytrium salamandrivorans] diamond 177 103 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium salamandrivorans
27168546 27168546 PRJNA188516_P_NODE_6002_length_162_cov_0.920354_g5952_i0 PRJNA188516 6002 162 0.920354 1.49097348 Gonapodya prolifera JEL478 1344416 Fungi Fungi 80.5 7.21e-17   NR KXS14289.1 1344416 g5952 i0 71.7 4.85185185185185 53 15 98.1 0 161 3 134 186 KXS14289.1 ribosomal protein L10e [Gonapodya prolifera JEL478] diamond 786 80.5 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales Gonapodyaceae Gonapodya Gonapodya prolifera
27186381 27186381 PRJNA188516_P_NODE_4142_length_169_cov_0.866667_g4092_i0 PRJNA188516 4142 169 0.866667 1.46466723 Eukaryota 2759 Fungi Fungi 58.9 2.56e-8   NR KAL3897430.1 2058121 g4092 i0 58.7 1.59763313609467 46 19 81.7 0 140 3 4 49 KAL3897430.1 MAG: hypothetical protein SGCHY_003421 [Lobulomycetales sp.] diamond 270 59.3 0.993254637436762 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Lobulomycetales     Lobulomycetales sp.
27358592 27358592 PRJNA188516_P_NODE_2503_length_217_cov_1.214286_g2453_i0 PRJNA188516 2503 217 1.214286 2.63500062 Gonapodya prolifera JEL478 1344416 Fungi Fungi 39.7 0.0394   NR KXS10009.1 1344416 g2453 i0 76 0.345622119815668 25 6 34.6 0 135 61 17 41 KXS10009.1 hypothetical protein M427DRAFT_63061 [Gonapodya prolifera JEL478] diamond 75 39.7 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales Gonapodyaceae Gonapodya Gonapodya prolifera
27881377 27881377 PRJNA188516_P_NODE_1845_length_257_cov_1.096154_g1795_i0 PRJNA188516 1845 257 1.096154 2.81711578 Eukaryota 2759 Fungi Fungi 62.8 4.76e-10   NR KAJ3231887.1 4814 g1795 i0 46.3 5.75486381322957 82 37 94.6 3 1 243 69 144 KAJ3231887.1 profilin, required for normal timing of actin polymerization in response to thermal stress [Chytriomyces hyalinus] diamond 1479 62.8 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Chytriomyces Chytriomyces hyalinus
28463701 28463701 PRJNA188516_P_NODE_4026_length_169_cov_0.866667_g3976_i0 PRJNA188516 4026 169 0.866667 1.46466723 Chytriomyces confervae 246404 Fungi Fungi 45.8 0.00113   NR TPX72599.1 246404 g3976 i0 53.7 0.958579881656805 54 16 83.4 2 163 23 174 225 TPX72599.1 hypothetical protein CcCBS67573_g05723 [Chytriomyces confervae] diamond 162 45.8 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Chytriomyces Chytriomyces confervae
28955171 28955171 PRJNA188516_P_NODE_5888_length_162_cov_2.761062_g5838_i0 PRJNA188516 5888 162 2.761062 4.47292044 Kappamyces 261096 Fungi Fungi 68.2 4.69e-13   NR KAJ3327085.1 2724210 g5838 i0 70 1.85185185185185 50 15 92.6 0 13 162 5 54 KAJ3327085.1 40S ribosomal protein S20, partial [Kappamyces sp. JEL0680] diamond 300 68.2 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales Kappamycetaceae Kappamyces Kappamyces sp. JEL0680
29049790 29049790 PRJNA188516_P_NODE_2788_length_205_cov_1.666667_g2738_i0 PRJNA188516 2788 205 1.666667 3.41666735 Eukaryota 2759 Fungi Fungi 77.4 2.7e-16   NR KAI9005567.1 82268 g2738 i0 63.6 21.1170731707317 55 20 80.5 0 3 167 69 123 KAI9005567.1 putative SNU13-component of the U4/U6.U5 snRNP [Hyaloraphidium curvatum] diamond 4329 77.8 0.994858611825193 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum
29537019 29537019 PRJNA188516_P_NODE_4090_length_169_cov_0.866667_g4040_i0 PRJNA188516 4090 169 0.866667 1.46466723 Batrachochytrium salamandrivorans 1357716 Fungi Fungi 54.7 8.34e-7   NR KAH9251342.1 1357716 g4040 i0 49.1 0.976331360946746 55 28 97.6 0 1 165 313 367 KAH9251342.1 hypothetical protein BASA81_010753 [Batrachochytrium salamandrivorans] diamond 165 54.7 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium salamandrivorans
29712325 29712325 PRJNA188516_P_NODE_4510_length_168_cov_0.873950_g4460_i0 PRJNA188516 4510 168 0.87395 1.468236 Fungi 4751 Fungi Fungi 104 1.37e-27   NR KAJ3191513.1 109884 g4460 i0 83.9 8.92857142857143 56 9 100 0 168 1 19 74 KAJ3191513.1 hypothetical protein HK101_007653 [Irineochytrium annulatum] diamond 1500 104 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Irineochytrium Irineochytrium annulatum
30136747 30136747 PRJNA188516_P_NODE_2592_length_213_cov_0.951220_g2542_i0 PRJNA188516 2592 213 0.95122 2.0260986 Piromyces sp. E2 73868 Fungi Fungi 76.3 6.74e-16   NR OUM66308.1 73868 g2542 i0 60.3 1.74647887323944 63 20 88.7 2 3 191 58 115 OUM66308.1 hypothetical protein PIROE2DRAFT_59484 [Piromyces sp. E2] diamond 372 76.3 1 Eukaryota Opisthokonta Fungi Chytridiomycota Neocallimastigomycetes Neocallimastigales Neocallimastigaceae Piromyces Piromyces sp. E2
30832188 30832188 PRJNA188516_P_NODE_5294_length_165_cov_0.896552_g5244_i0 PRJNA188516 5294 165 0.896552 1.4793108 Zopfochytrium polystomum 2211651 Fungi Fungi 49.3 5.97e-5   NR KAI9356781.1 2211651 g5244 i0 62.7 2.89090909090909 51 19 92.7 0 163 11 70 120 KAI9356781.1 ribosomal protein L30, ferredoxin-like fold domain-containing protein [Zopfochytrium polystomum] diamond 477 49.3 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Zopfochytrium Zopfochytrium polystomum
31337806 31337806 PRJNA188516_P_NODE_4716_length_167_cov_0.881356_g4666_i0 PRJNA188516 4716 167 0.881356 1.47186452 Batrachochytrium salamandrivorans 1357716 Fungi Fungi 64.3 2.6200000000000003e-10   NR KAH9261705.1 1357716 g4666 i0 53.8 11.1017964071856 52 24 93.4 0 156 1 59 110 KAH9261705.1 hypothetical protein BASA81_000361 [Batrachochytrium salamandrivorans] diamond 1854 64.3 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium salamandrivorans
31780563 31780563 PRJNA188516_P_NODE_5857_length_163_cov_0.912281_g5807_i0 PRJNA188516 5857 163 0.912281 1.48701803 Quaeritorhiza haematococci 2654861 Fungi Fungi 67.8 1.86e-11   NR KAJ3092457.1 2654861 g5807 i0 56.9 0.938650306748466 51 22 93.9 0 153 1 380 430 KAJ3092457.1 hypothetical protein HK102_007081 [Quaeritorhiza haematococci] diamond 153 67.8 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes   Quaeritorhizaceae Quaeritorhiza Quaeritorhiza haematococci
32033839 32033839 PRJNA188516_P_NODE_2618_length_212_cov_0.957055_g2568_i0 PRJNA188516 2618 212 0.957055 2.0289566 Hyaloraphidium curvatum 82268 Fungi Fungi 44.3 0.00692   NR KAI9002515.1 82268 g2568 i0 46.4 0.792452830188679 56 29 77.8 1 166 2 62 117 KAI9002515.1 hypothetical protein DFJ74DRAFT_695896 [Hyaloraphidium curvatum] diamond 168 44.3 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;