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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA188516" and tax_phylum = "Chordata"

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tax_superkingdom 1

tax_phylum 1

  • Chordata · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA188516 · 11 ✖

analysis 1

  • diamond · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22731951 22731951 PRJNA188516_P_NODE_1638_length_279_cov_0.900000_g1588_i0 PRJNA188516 1638 279 0.9 2.511 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 114 2e-29   NR OCT94035.1 8355 g1588 i0 71.4 105.043010752688 77 22 82.8 0 49 279 108 184 OCT94035.1 hypothetical protein XELAEV_18011698mg [Xenopus laevis] diamond 29307 115 0.991304347826087 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Pipidae Xenopus Xenopus laevis
26743182 26743182 PRJNA188516_P_NODE_3201_length_190_cov_1.475177_g3151_i0 PRJNA188516 3201 190 1.475177 2.8028363 Artiodactyla 91561 Chordata Chordata 80.5 8.87e-16   NR TKC36767.1 40151 g3151 i0 66.1 8.30526315789474 62 21 97.9 0 3 188 732 793 TKC36767.1 hypothetical protein EI555_004718, partial [Monodon monoceros] diamond 1578 80.9 0.995055624227441 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Monodontidae Monodon Monodon monoceros
26915717 26915717 PRJNA188516_P_NODE_5802_length_163_cov_0.912281_g5752_i0 PRJNA188516 5802 163 0.912281 1.48701803 Bufotes viridis 30338 Chordata Chordata 44.7 0.00268   NR CAK8639140.1 30338 g5752 i0 53.7 1.50920245398773 41 19 75.5 0 1 123 522 562 CAK8639140.1 B-cell lymphoma 6 protein homolog [Bufotes viridis] diamond 246 44.7 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Bufonidae Bufotes Bufotes viridis
27706150 27706150 PRJNA188516_P_NODE_2564_length_214_cov_1.260606_g2514_i0 PRJNA188516 2564 214 1.260606 2.69769684 Lepidochelys olivacea 27788 Chordata Chordata 59.3 3.49e-8   NR CAJ90462.1 27788 g2514 i0 44.9 7.80841121495327 69 38 96.7 0 212 6 261 329 CAJ90462.1 NADH dehydrogenase subunit 4 [Lepidochelys olivacea] diamond 1671 59.7 0.993299832495812 Eukaryota Opisthokonta Metazoa Chordata   Testudines Cheloniidae Lepidochelys Lepidochelys olivacea
28179105 28179105 PRJNA188516_P_NODE_6066_length_162_cov_0.920354_g6016_i0 PRJNA188516 6066 162 0.920354 1.49097348 Taeniopygia guttata 59729 Chordata Chordata 39.7 0.0355   NR ACH44493.1 59729 g6016 i0 58.8 0.62962962962963 34 11 57.4 1 147 55 7 40 ACH44493.1 putative inosine triphosphatase isoform variant 2 [Taeniopygia guttata] diamond 102 39.7 1 Eukaryota Opisthokonta Metazoa Chordata Aves Passeriformes Estrildidae Taeniopygia Taeniopygia guttata
29852881 29852881 PRJNA188516_P_NODE_3791_length_174_cov_0.832000_g3741_i0 PRJNA188516 3791 174 0.832 1.44768 Engystomops pustulosus 76066 Chordata Chordata 41.6 0.0107   NR KAG8554186.1 76066 g3741 i0 71.4 1.44827586206897 28 8 48.3 0 167 84 73 100 KAG8554186.1 hypothetical protein GDO81_003707 [Engystomops pustulosus] diamond 252 41.6 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Leptodactylidae Engystomops Engystomops pustulosus
30628639 30628639 PRJNA188516_P_NODE_1633_length_279_cov_2.143478_g1583_i0 PRJNA188516 1633 279 2.143478 5.98030362 Chordata 7711 Chordata Chordata 42.4 0.0295   NR CAK8685383.1 159417 g1583 i0 52.5 1.33333333333333 40 19 43 0 189 70 60 99 CAK8685383.1 unnamed protein product [Clavelina lepadiformis] diamond 372 42.4 1 Eukaryota Opisthokonta Metazoa Chordata Ascidiacea Aplousobranchia Clavelinidae Clavelina Clavelina lepadiformis
31116345 31116345 PRJNA188516_P_NODE_5775_length_163_cov_0.912281_g5725_i0 PRJNA188516 5775 163 0.912281 1.48701803 Oreolalax omeimontis 445777 Chordata Chordata 57.8 5.84e-8   NR WDD39345.1 445777 g5725 i0 66.7 7.95092024539877 54 18 99.4 0 163 2 105 158 WDD39345.1 NADH dehydrogenase subunit 1 [Oreolalax omeimontis] diamond 1296 57.8 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Megophryidae Oreolalax Oreolalax omeimontis
31369763 31369763 PRJNA188516_P_NODE_6056_length_162_cov_0.920354_g6006_i0 PRJNA188516 6056 162 0.920354 1.49097348 Polypterus senegalus 55291 Chordata Chordata 75.1 3.19e-14   NR KAG2460242.1 55291 g6006 i0 60.4 0.981481481481482 53 21 98.1 0 3 161 231 283 KAG2460242.1 TCB1 transposase, partial [Polypterus senegalus] diamond 159 75.1 1 Eukaryota Opisthokonta Metazoa Chordata Cladistia Polypteriformes Polypteridae Polypterus Polypterus senegalus
31559495 31559495 PRJNA188516_P_NODE_6196_length_159_cov_3.809091_g6146_i0 PRJNA188516 6196 159 3.809091 6.05645469 Cavia porcellus 10141 Chordata Chordata 41.2 0.0392   NR XP_003470245.2 10141 g6146 i0 83.3 1.43396226415094 24 4 45.3 0 88 159 69 92 XP_003470245.2 eukaryotic translation initiation factor 1A, X-chromosomal-like [Cavia porcellus] diamond 228 41.2 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Caviidae Cavia Cavia porcellus
32558149 32558149 PRJNA188516_P_NODE_6119_length_162_cov_0.920354_g6069_i0 PRJNA188516 6119 162 0.920354 1.49097348 Metazoa 33208 Chordata Chordata 60.1 7.4e-10   NR KAG8520360.1 202257 g6069 i0 63 59.037037037037 54 18 100 1 162 1 10 61 KAG8520360.1 60S ribosomal protein L27 [Galemys pyrenaicus] diamond 9564 60.1 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Eulipotyphla Talpidae Galemys Galemys pyrenaicus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;