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contig_metadata

12 rows where analysis = "diamond", bioproject = "PRJNA188516" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 12 ✖

bioproject 1

  • PRJNA188516 · 12 ✖

analysis 1

  • diamond · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9983230 9983230 PRJNA188516_P_NODE_1768_length_265_cov_0.976852_g1718_i0 PRJNA188516 1768 265 0.976852 2.5886578 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 92 6.16e-20   NR BBJ29173.1 5755 g1718 i0 50.6 13.177358490566 89 43 99.6 1 2 265 166 254 BBJ29173.1 cysteine proteinase 5 [Acanthamoeba castellanii] diamond 3492 92 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
14394861 14394861 PRJNA188516_P_NODE_2032_length_243_cov_1.072165_g1982_i0 PRJNA188516 2032 243 1.072165 2.60536095 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 90.1 9.61e-22   NR PRP81011.1 1890364 g1982 i0 77.4 3.12345679012346 62 13 76.5 1 26 211 9 69 PRP81011.1 40S ribosomal protein S28 [Planoprotostelium fungivorum] diamond 759 90.1 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
26662125 26662125 PRJNA188516_P_NODE_6061_length_162_cov_0.920354_g6011_i0 PRJNA188516 6061 162 0.920354 1.49097348 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 79 2.18e-15   NR KAH3764675.1 1580589 g6011 i0 57.1 1.03703703703704 56 21 98.1 1 159 1 660 715 KAH3764675.1 e3 ubiquitin-protein ligase [Pelomyxa schiedti] diamond 168 79 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
26725344 26725344 PRJNA188516_P_NODE_5361_length_164_cov_0.904348_g5311_i0 PRJNA188516 5361 164 0.904348 1.48313072 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 60.1 9.64e-9   NR AGC82269.1 5755 g5311 i0 53.5 0.786585365853659 43 20 78.7 0 162 34 94 136 AGC82269.1 cAMP phosphodiesterase [Acanthamoeba castellanii] diamond 129 60.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28702469 28702469 PRJNA188516_P_NODE_4907_length_166_cov_0.888889_g4857_i0 PRJNA188516 4907 166 0.888889 1.47555574 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 87.4 1.53e-18   NR ACO50132.1 308475 g4857 i0 67.9 5.56626506024096 53 17 95.8 0 164 6 158 210 ACO50132.1 elongation factor 1 alpha, partial [Paramoeba branchiphila] diamond 924 87.4 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba branchiphila
28860098 28860098 PRJNA188516_P_NODE_5828_length_163_cov_0.912281_g5778_i0 PRJNA188516 5828 163 0.912281 1.48701803 Eumycetozoa 142796 Evosea other_Eukaryota 60.5 6.77e-9   NR KAF2073298.1 133409 g5778 i0 51.9 1.87730061349693 52 25 95.7 0 161 6 491 542 KAF2073298.1 hypothetical protein CYY_005397 [Polysphondylium violaceum] diamond 306 60.8 0.995065789473684 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
29095138 29095138 PRJNA188516_P_NODE_5568_length_164_cov_0.886957_g5518_i0 PRJNA188516 5568 164 0.886957 1.45460948 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 68.9 7.32e-12   NR PRP80802.1 1890364 g5518 i0 60.8 1.86585365853659 51 20 93.3 0 160 8 263 313 PRP80802.1 clathrin heavy chain, partial [Planoprotostelium fungivorum] diamond 306 68.9 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29316025 29316025 PRJNA188516_P_NODE_5369_length_164_cov_0.904348_g5319_i0 PRJNA188516 5369 164 0.904348 1.48313072 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 42 0.0243   NR XP_004339741.1 1257118 g5319 i0 42.3 0.951219512195122 52 28 95.1 1 159 4 21 70 XP_004339741.1 Armadillo/betacatenin-like repeat domain containing protein [Acanthamoeba castellanii str. Neff] diamond 156 42 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30295520 30295520 PRJNA188516_P_NODE_2992_length_197_cov_2.527027_g2942_i0 PRJNA188516 2992 197 2.527027 4.97824319 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 76.6 1.96e-14   NR PRP77394.1 1890364 g2942 i0 44.6 0.989847715736041 65 36 99 0 196 2 300 364 PRP77394.1 hypothetical protein PROFUN_14400 [Planoprotostelium fungivorum] diamond 195 76.6 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
31748946 31748946 PRJNA188516_P_NODE_5177_length_165_cov_0.896552_g5127_i0 PRJNA188516 5177 165 0.896552 1.4793108 Amoeba proteus 5775 Tubulinea other_Eukaryota 99.4 5.96e-23   NR AAP88974.1 5775 g5127 i0 87 4.98181818181818 54 7 98.2 0 162 1 11 64 AAP88974.1 S-adenosylmethionine synthetase 2 [Amoeba proteus] diamond 822 99.4 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
32019999 32019999 PRJNA188516_P_NODE_5358_length_164_cov_0.904348_g5308_i0 PRJNA188516 5358 164 0.904348 1.48313072 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 66.2 6.5e-11   NR XP_020428166.1 670386 g5308 i0 55.6 8.76219512195122 54 24 98.8 0 163 2 458 511 XP_020428166.1 pleckstrin domain-containing protein [Heterostelium album PN500] diamond 1437 66.6 0.993993993993994 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
32381920 32381920 PRJNA188516_P_NODE_4739_length_167_cov_0.881356_g4689_i0 PRJNA188516 4739 167 0.881356 1.47186452 Polysphondylium violaceum 133409 Evosea other_Eukaryota 54.7 8.11e-7   NR KAF2078218.1 133409 g4689 i0 54.2 1.72455089820359 48 21 84.4 1 25 165 1172 1219 KAF2078218.1 hypothetical protein CYY_000508 [Polysphondylium violaceum] diamond 288 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;