RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA177642" and tax_superkingdom = "Viruses"

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tax_phylum 2

tax_kingdom 2

tax_superkingdom 1

  • Viruses · 9 ✖

bioproject 1

  • PRJNA177642 · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26630803 26630803 PRJNA177642_P_NODE_17781_length_165_cov_1.882353_g16556_i0 PRJNA177642 17781 165 1.882353 3.10588245 Caudoviricetes sp. 2832643 Viruses Viruses 97.8 5.1e-22   NR XOR76509.1 2832643 g16556 i0 84.6 0.945454545454545 52 8 94.5 0 163 8 339 390 XOR76509.1 MAG: hypothetical protein [Caudoviricetes sp.] diamond 156 97.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
26662119 26662119 PRJNA177642_P_NODE_6961_length_499_cov_11.817021_g5796_i0 PRJNA177642 6961 499 11.817021 58.96693479 Betacoronavirus pandemicum 3418604 Viruses Viruses 45.4 0.0377   NR 8XYZ_B 2697049 g5796 i0 57.9 0.228456913827655 38 15 22.8 1 1 114 3 39 8XYZ_B Chain B, Signal peptide, Spike protein S1 [Severe acute respiratory syndrome coronavirus 2] diamond 114 45.4 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
27863523 27863523 PRJNA177642_P_NODE_17685_length_166_cov_1.029197_g16460_i0 PRJNA177642 17685 166 1.029197 1.70846702 Bacillus phage vB_BanS-Thrax2 2951250 Viruses Viruses 50.1 3.28e-5   NR UUV46239.1 2951250 g16460 i0 52.7 0.993975903614458 55 21 90.4 1 164 15 192 246 UUV46239.1 RNA ligase [Bacillus phage vB_BanS-Thrax2] diamond 165 50.1 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Bacillus phage vB_BanS-Thrax2
27926772 27926772 PRJNA177642_P_NODE_16125_length_175_cov_1.917808_g14900_i0 PRJNA177642 16125 175 1.917808 3.356164 uncultured Caudovirales phage 2100421 Viruses Viruses 52.8 3.61e-7   NR CAB4138490.1 2100421 g14900 i0 52.3 0.754285714285714 44 21 75.4 0 2 133 44 87 CAB4138490.1 hypothetical protein UFOVP331_68 [uncultured Caudovirales phage] diamond 132 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Peduoviridae Maltschvirus Maltschvirus maltsch
28337248 28337248 PRJNA177642_P_NODE_16066_length_176_cov_1.829932_g14841_i0 PRJNA177642 16066 176 1.829932 3.22068032 Caudoviricetes sp. 2832643 Viruses Viruses 84.3 3.32e-17   NR XOR29232.1 2832643 g14841 i0 69.5 1.00568181818182 59 17 98.9 1 3 176 812 870 XOR29232.1 MAG: hypothetical protein [Caudoviricetes sp.] diamond 177 84.3 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
28937228 28937228 PRJNA177642_P_NODE_18008_length_164_cov_2.000000_g16783_i0 PRJNA177642 18008 164 2 3.28 Bacillus phage vB_BcoS-136 2419619 Viruses Viruses 58.9 2.47e-8   NR YP_010681477.1 2419619 g16783 i0 58.5 0.969512195121951 53 19 97 1 162 4 279 328 YP_010681477.1 AAA-like domain protein [Bacillus phage vB_BcoS-136] diamond 159 58.9 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Kenyattavirus Kenyattavirus kv136
30390320 30390320 PRJNA177642_P_NODE_14493_length_209_cov_1.533333_g13268_i0 PRJNA177642 14493 209 1.533333 3.20466597 Geobacillus virus E2 447909 Viruses Viruses 98.2 1.4000000000000002e-23   NR YP_001285807.1 447909 g13268 i0 96 1.43540669856459 50 2 71.8 0 207 58 155 204 YP_001285807.1 terminase small subunit [Geobacillus virus E2] diamond 300 98.2 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Geobacillus virus E2
31085012 31085012 PRJNA177642_P_NODE_2595_length_956_cov_7.025890_g1868_i0 PRJNA177642 2595 956 7.02589 67.1675084 Betacoronavirus pandemicum 3418604 Viruses Viruses 55.1 3.16e-4   NR 7LX5_B 2697049 g1868 i0 68.1 0.304393305439331 47 14 14.4 1 440 577 32 78 7LX5_B Chain B, Spike glycoprotein [Severe acute respiratory syndrome coronavirus 2] diamond 291 55.1 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
31717437 31717437 PRJNA177642_P_NODE_9917_length_360_cov_1.737160_g8696_i0 PRJNA177642 9917 360 1.73716 6.253776 Bacillus phage pW2 2500559 Viruses Viruses 56.6 1.77e-6   NR YP_010680057.1 2500559 g8696 i0 46.8 0.516666666666667 62 33 51.7 0 3 188 160 221 YP_010680057.1 exonuclease [Bacillus phage pW2] diamond 186 56.6 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Sophritavirus Sophritavirus pW2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;