RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA177642" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

bioproject 1

  • PRJNA177642 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_phylum 0

tax_kingdom 0

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30832185 30832185 PRJNA177642_P_NODE_17634_length_166_cov_1.051095_g16409_i0 PRJNA177642 17634 166 1.051095 1.7448177 archaeon 1906665 Archaea Archaea 102 5.099999999999999e-24   NR RYG68167.1 1906665 g16409 i0 77.8 1.95180722891566 54 12 97.6 0 3 164 377 430 RYG68167.1 MAG: S10 family peptidase [archaeon] diamond 324 102 1 Archaea               archaeon
32445359 32445359 PRJNA177642_P_NODE_16779_length_170_cov_1.021277_g15554_i0 PRJNA177642 16779 170 1.021277 1.7361709 archaeon 1906665 Archaea Archaea 97.1 2.73e-22   NR RYG64343.1 1906665 g15554 i0 83.9 0.988235294117647 56 9 98.8 0 2 169 47 102 RYG64343.1 MAG: hypothetical protein EON64_14200 [archaeon] diamond 168 97.1 1 Archaea               archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;