RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA177642" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA177642 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26662119 26662119 PRJNA177642_P_NODE_6961_length_499_cov_11.817021_g5796_i0 PRJNA177642 6961 499 11.817021 58.96693479 Betacoronavirus pandemicum 3418604 Viruses Viruses 45.4 0.0377   NR 8XYZ_B 2697049 g5796 i0 57.9 0.228456913827655 38 15 22.8 1 1 114 3 39 8XYZ_B Chain B, Signal peptide, Spike protein S1 [Severe acute respiratory syndrome coronavirus 2] diamond 114 45.4 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
31085012 31085012 PRJNA177642_P_NODE_2595_length_956_cov_7.025890_g1868_i0 PRJNA177642 2595 956 7.02589 67.1675084 Betacoronavirus pandemicum 3418604 Viruses Viruses 55.1 3.16e-4   NR 7LX5_B 2697049 g1868 i0 68.1 0.304393305439331 47 14 14.4 1 440 577 32 78 7LX5_B Chain B, Spike glycoprotein [Severe acute respiratory syndrome coronavirus 2] diamond 291 55.1 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;