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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA177642" and tax_phylum = "Bdellovibrionota"

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tax_superkingdom 1

tax_phylum 1

  • Bdellovibrionota · 9 ✖

tax_kingdom 1

bioproject 1

  • PRJNA177642 · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
365448 365448 PRJNA177642_P_NODE_16221_length_173_cov_2.944444_g14996_i0 PRJNA177642 16221 173 2.944444 5.09388812 Bacteriovoracaceae bacterium 2081706 Bacteria Bacteria 128 5.19e-36   NR MBY0518327.1 2081706 g14996 i0 96.5 1.97687861271676 57 2 98.8 0 172 2 51 107 MBY0518327.1 ubiquinol-cytochrome c reductase iron-sulfur subunit [Bacteriovoracaceae bacterium] diamond 342 128 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
27263684 27263684 PRJNA177642_P_NODE_17263_length_168_cov_1.000000_g16038_i0 PRJNA177642 17263 168 1 1.68 Bacteriovoracaceae bacterium 2081706 Bacteria Bacteria 92.4 1.71e-20   NR HXH31597.1 2081706 g16038 i0 78.2 0.982142857142857 55 12 98.2 0 4 168 278 332 HXH31597.1 hypothetical protein [Bacteriovoracaceae bacterium] diamond 165 92.4 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
27737642 27737642 PRJNA177642_P_NODE_17244_length_168_cov_1.014388_g16019_i0 PRJNA177642 17244 168 1.014388 1.70417184 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 94.7 3.9e-21   NR HEY8280239.1 3034175 g16019 i0 83.3 0.964285714285714 54 9 96.4 0 164 3 234 287 HEY8280239.1 glutamate--cysteine ligase [Bdellovibrionota bacterium] diamond 162 94.7 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
28021643 28021643 PRJNA177642_P_NODE_18665_length_162_cov_1.045113_g17440_i0 PRJNA177642 18665 162 1.045113 1.69308306 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 57.4 8.12e-8   NR HEY8278520.1 3034175 g17440 i0 78.4 0.685185185185185 37 8 68.5 0 45 155 4 40 HEY8278520.1 esterase-like activity of phytase family protein [Bdellovibrionota bacterium] diamond 111 57.4 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
30263820 30263820 PRJNA177642_P_NODE_16132_length_175_cov_1.767123_g14907_i0 PRJNA177642 16132 175 1.767123 3.09246525 Bacteriovoracaceae bacterium 2081706 Bacteria Bacteria 115 9.97e-30   NR NOT78427.1 2081706 g14907 i0 91.4 0.994285714285714 58 5 99.4 0 1 174 124 181 NOT78427.1 hypothetical protein [Bacteriovoracaceae bacterium] diamond 174 115 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
31147765 31147765 PRJNA177642_P_NODE_16495_length_172_cov_1.006993_g15270_i0 PRJNA177642 16495 172 1.006993 1.73202796 Micavibrio aeruginosavorus 349221 Bacteria Bacteria 42.7 0.00247   NR WP_041802748.1 349221 g15270 i0 85.7 0.366279069767442 21 3 36.6 0 2 64 53 73 WP_041802748.1 helix-turn-helix domain-containing protein [Micavibrio aeruginosavorus] diamond 63 42.7 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio aeruginosavorus
31559488 31559488 PRJNA177642_P_NODE_18616_length_162_cov_1.067669_g17391_i0 PRJNA177642 18616 162 1.067669 1.72962378 Bdellovibrio sp. 28201 Bacteria Bacteria 70.9 8.49e-13   NR NUN05055.1 28201 g17391 i0 78.9 0.703703703703704 38 8 70.4 0 1 114 252 289 NUN05055.1 hypothetical protein [Bdellovibrio sp.] diamond 114 70.9 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp.
31875437 31875437 PRJNA177642_P_NODE_18577_length_162_cov_1.082707_g17352_i0 PRJNA177642 18577 162 1.082707 1.75398534 Peredibacter starrii 28202 Bacteria Bacteria 76.3 1.86e-14   NR WP_321399407.1 28202 g17352 i0 69.8 0.981481481481482 53 16 98.1 0 160 2 181 233 WP_321399407.1 endopeptidase La [Peredibacter starrii] diamond 159 76.3 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Peredibacter Peredibacter starrii
32476945 32476945 PRJNA177642_P_NODE_18159_length_164_cov_1.044444_g16934_i0 PRJNA177642 18159 164 1.044444 1.71288816 Bacteriovorax stolpii 960 Bacteria Bacteria 98.2 3.74e-22   NR WP_142410267.1 960 g16934 i0 85.2 2.96341463414634 54 8 98.8 0 3 164 796 849 WP_142410267.1 tetratricopeptide repeat protein [Bacteriovorax stolpii] diamond 486 98.2 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Bacteriovorax Bacteriovorax stolpii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;