RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA177642" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 3 ✖

bioproject 1

  • PRJNA177642 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23317541 23317541 PRJNA177642_P_NODE_14359_length_213_cov_2.059783_g13134_i0 PRJNA177642 14359 213 2.059783 4.38733779 Cyanobacteria bacterium J06553_1 3023125 Bacteria Bacteria 67.8 2.61e-11   NR MEL7520179.1 3023125 g13134 i0 52.2 0.943661971830986 67 32 94.4 0 208 8 117 183 MEL7520179.1 hypothetical protein [Cyanobacteria bacterium J06553_1] diamond 201 67.8 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota         Cyanobacteria bacterium J06553_1
29270494 29270494 PRJNA177642_P_NODE_17929_length_165_cov_1.036765_g16704_i0 PRJNA177642 17929 165 1.036765 1.71066225 Bacteria 2 Bacteria Bacteria 79.7 1.22e-15   NR MBS1996879.1 2807731 g16704 i0 65.5 3 55 19 100 0 165 1 198 252 MBS1996879.1 FtsX-like permease family protein [Cyanobacteria bacterium SZAS LIN-2] diamond 495 79.7 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota         Cyanobacteria bacterium SZAS LIN-2
29916164 29916164 PRJNA177642_P_NODE_6231_length_554_cov_1.340952_g5111_i0 PRJNA177642 6231 554 1.340952 7.42887408 Coleofasciculus sp. Co-bin14 2768886 Bacteria Bacteria 73.2 1.24e-11   NR MBD0344629.1 2768886 g5111 i0 75.6 0.731046931407942 45 11 24.4 0 200 334 243 287 MBD0344629.1 hypothetical protein [Coleofasciculus sp. Co-bin14] diamond 405 73.2 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Coleofasciculales Coleofasciculaceae Coleofasciculus Coleofasciculus sp. Co-bin14

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;