RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA169559" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA169559 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1054830 1054830 PRJNA169559_P_NODE_11581_length_495_cov_2.427039_g9747_i0 PRJNA169559 11581 495 2.427039 12.01384305 root 1 Root_unresolved Root_unresolved 133 2.61e-33   NR KAK2189433.1 27915 g9747 i0 54.1 16.2424242424242 133 54 76.4 2 382 5 341 473 KAK2189433.1 hypothetical protein NP493_106g00021 [Ridgeia piscesae] diamond 8040 133 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Ridgeia Ridgeia piscesae
11843744 11843744 PRJNA169559_P_NODE_48190_length_163_cov_1.589552_g46113_i0 PRJNA169559 48190 163 1.589552 2.59096976 Dimorphilus gyrociliatus 2664684 Annelida Annelida 110 1.03e-27   NR CAD5121000.1 2664684 g46113 i0 84.2 1.04907975460123 57 6 99.4 1 163 2 61 117 CAD5121000.1 DgyrCDS9544 [Dimorphilus gyrociliatus] diamond 171 110 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Dinophilidae Dimorphilus Dimorphilus gyrociliatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;