RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA169559" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA169559 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27295184 27295184 PRJNA169559_P_NODE_24683_length_306_cov_2.389892_g22607_i0 PRJNA169559 24683 306 2.389892 7.31306952 Candidatus Dependentiae bacterium 2030827 Bacteria Bacteria 47 0.00246   NR RTL06914.1 2030827 g22607 i0 39.7 0.666666666666667 68 35 60.8 1 16 201 306 373 RTL06914.1 MAG: hypothetical protein EKK58_03720 [Candidatus Dependentiae bacterium] diamond 204 47 1 Bacteria Bacteria candidate phyla             Candidatus Babelota bacterium
28179091 28179091 PRJNA169559_P_NODE_47766_length_171_cov_3.394366_g45689_i0 PRJNA169559 47766 171 3.394366 5.80436586 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 41.2 0.0481   NR GIX08090.1 2026781 g45689 i0 72.7 0.385964912280702 22 5 38.6 1 101 36 207 227 GIX08090.1 MAG: sugar phosphate isomerase [Candidatus Poribacteria bacterium] diamond 66 41.2 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
28526863 28526863 PRJNA169559_P_NODE_32447_length_255_cov_1.969027_g30371_i0 PRJNA169559 32447 255 1.969027 5.02101885 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 50.8 1.73e-5   NR MBP9798164.1 2026804 g30371 i0 36.5 0.741176470588235 63 40 74.1 0 10 198 82 144 MBP9798164.1 hypothetical protein [Candidatus Woesebacteria bacterium] diamond 189 50.8 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium
31843831 31843831 PRJNA169559_P_NODE_30617_length_262_cov_1.858369_g28541_i0 PRJNA169559 30617 262 1.858369 4.86892678 Candidatus Absconditabacterales bacterium 2927939 Bacteria Bacteria 100 6.27e-23   NR HNG96902.1 2927939 g28541 i0 63.3 0.904580152671756 79 27 90.5 1 237 1 8 84 HNG96902.1 hypothetical protein [Candidatus Absconditabacterales bacterium] diamond 237 100 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota   Candidatus Absconditabacterales     Candidatus Absconditabacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;