RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA168635" and tax_phylum = "Thermoproteota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoproteota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA168635 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13807718 13807718 PRJNA168635_P_NODE_331_length_1125_cov_11.479554_g240_i0 PRJNA168635 331 1125 11.479554 129.1449825 root 1 Root_unresolved Root_unresolved 73.6 1.7e-12   NR ABO09284.1 410359 g240 i0 61.2 0.413333333333333 67 26 17.9 0 277 77 8 74 ABO09284.1 hypothetical protein Pcal_1868 [Pyrobaculum calidifontis JCM 11548] diamond 465 74.3 0.990578734858681 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Pyrobaculum Pyrobaculum calidifontis
26852652 26852652 PRJNA168635_P_NODE_15221_length_206_cov_1.324841_g14805_i0 PRJNA168635 15221 206 1.324841 2.72917246 Thermoprotei archaeon 2250277 Archaea Archaea 64.3 5.6e-10   NR RLE97824.1 2250277 g14805 i0 50.7 2.95631067961165 67 33 97.6 0 1 201 318 384 RLE97824.1 MAG: hypothetical protein DRJ63_08630, partial [Thermoprotei archaeon] diamond 609 64.3 1 Archaea   Thermoproteati Thermoproteota Thermoprotei       Thermoprotei archaeon
32160514 32160514 PRJNA168635_P_NODE_20498_length_180_cov_12.702290_g20082_i0 PRJNA168635 20498 180 12.70229 22.864122 Thermoprotei archaeon 2250277 Archaea Archaea 64.7 2.11e-10   NR RLE97821.1 2250277 g20082 i0 57.4 1.01666666666667 61 23 96.7 1 178 5 91 151 RLE97821.1 MAG: hypothetical protein DRJ63_08615 [Thermoprotei archaeon] diamond 183 64.7 1 Archaea   Thermoproteati Thermoproteota Thermoprotei       Thermoprotei archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;