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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA168635" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA168635 · 7 ✖

analysis 1

  • diamond · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28558378 28558378 PRJNA168635_P_NODE_31927_length_162_cov_0.920354_g31511_i0 PRJNA168635 31927 162 0.920354 1.49097348 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 50.1 8.24e-6   NR HUX59997.1 2651163 g31511 i0 53.2 0.87037037037037 47 21 87 1 4 144 17 62 HUX59997.1 hypothetical protein [Ignavibacteriaceae bacterium] diamond 141 50.1 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium
28716182 28716182 PRJNA168635_P_NODE_28187_length_166_cov_0.888889_g27771_i0 PRJNA168635 28187 166 0.888889 1.47555574 Ignavibacteria bacterium 2053306 Bacteria Bacteria 84 2.34e-17   NR MBK7032594.1 2053306 g27771 i0 70.9 1.98795180722892 55 16 99.4 0 2 166 198 252 MBK7032594.1 redox-regulated ATPase YchF [Ignavibacteria bacterium] diamond 330 84 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
29884521 29884521 PRJNA168635_P_NODE_25971_length_168_cov_1.714286_g25555_i0 PRJNA168635 25971 168 1.714286 2.88000048 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 52.8 3.14e-6   NR MBV6513868.1 2651163 g25555 i0 70.6 0.607142857142857 34 10 60.7 0 166 65 218 251 MBV6513868.1 hypothetical protein [Ignavibacteriaceae bacterium] diamond 102 52.8 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium
29884522 29884522 PRJNA168635_P_NODE_26231_length_168_cov_0.873950_g25815_i0 PRJNA168635 26231 168 0.87395 1.468236 Ignavibacteria bacterium 2053306 Bacteria Bacteria 56.2 8.36e-8   NR MBM4162032.1 2053306 g25815 i0 57.8 6.28571428571429 45 18 78.6 1 7 138 33 77 MBM4162032.1 lipocalin family protein [Ignavibacteria bacterium] diamond 1056 56.2 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
31717406 31717406 PRJNA168635_P_NODE_19437_length_184_cov_1.925926_g19021_i0 PRJNA168635 19437 184 1.925926 3.54370384 Ignavibacteria bacterium 2053306 Bacteria Bacteria 72 2.51e-14   NR MBK7186610.1 2053306 g19021 i0 62.3 0.864130434782609 53 19 84.8 1 156 1 1 53 MBK7186610.1 DUF2591 family protein [Ignavibacteria bacterium] diamond 159 72 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
32033815 32033815 PRJNA168635_P_NODE_24498_length_170_cov_2.479339_g24082_i0 PRJNA168635 24498 170 2.479339 4.2148763 Ignavibacteria bacterium 2053306 Bacteria Bacteria 42.7 0.00191   NR MFA5405186.1 2053306 g24082 i0 53.3 0.529411764705882 30 14 52.9 0 79 168 23 52 MFA5405186.1 hypothetical protein [Ignavibacteria bacterium] diamond 90 42.7 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
32540262 32540262 PRJNA168635_P_NODE_20919_length_179_cov_2.369231_g20503_i0 PRJNA168635 20919 179 2.369231 4.24092349 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 122 9.68e-31   NR MFO7525010.1 2651163 g20503 i0 88.1 19.7765363128492 59 7 98.9 0 179 3 23 81 MFO7525010.1 thioredoxin domain-containing protein [Ignavibacteriaceae bacterium] diamond 3540 122 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;