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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA168635" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA168635 · 11 ✖

analysis 1

  • diamond · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26757254 26757254 PRJNA168635_P_NODE_10581_length_253_cov_12.485294_g10166_i0 PRJNA168635 10581 253 12.485294 31.58779382 Rhizoclosmatium globosum 329046 Fungi Fungi 60.1 6.67e-10   NR ORY18463.1 329046 g10166 i0 56.6 0.628458498023715 53 23 62.8 0 22 180 1 53 ORY18463.1 hypothetical protein BCR33DRAFT_730870 [Rhizoclosmatium globosum] diamond 159 60.1 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Rhizoclosmatium Rhizoclosmatium globosum
27390176 27390176 PRJNA168635_P_NODE_24923_length_169_cov_2.500000_g24507_i0 PRJNA168635 24923 169 2.5 4.225 Geranomyces variabilis 109894 Fungi Fungi 43.1 0.0104   NR KAJ3173729.1 109894 g24507 i0 47.8 0.816568047337278 46 24 81.7 0 20 157 94 139 KAJ3173729.1 hypothetical protein HDU88_002818 [Geranomyces variabilis] diamond 138 43.1 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Geranomyces Geranomyces variabilis
28052959 28052959 PRJNA168635_P_NODE_19825_length_183_cov_1.477612_g19409_i0 PRJNA168635 19825 183 1.477612 2.70402996 Cladochytrium replicatum 109936 Fungi Fungi 42 0.033   NR KAI8799511.1 109936 g19409 i0 50 0.819672131147541 50 21 82 1 34 183 870 915 KAI8799511.1 tubulin folding cofactor D C terminal-domain-containing protein [Cladochytrium replicatum] diamond 150 42 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Cladochytriales Cladochytriaceae Cladochytrium Cladochytrium replicatum
28134130 28134130 PRJNA168635_P_NODE_25385_length_169_cov_0.866667_g24969_i0 PRJNA168635 25385 169 0.866667 1.46466723 Caulochytriales 2231168 Fungi Fungi 46.2 8.35e-4   NR RKP02328.1 1555241 g24969 i0 83.3 0.940828402366864 24 4 42.6 0 169 98 715 738 RKP02328.1 hypothetical protein CXG81DRAFT_25021 [Caulochytrium protostelioides] diamond 159 46.2 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Caulochytriales Caulochytriaceae Caulochytrium Caulochytrium protostelioides
28955162 28955162 PRJNA168635_P_NODE_27008_length_167_cov_1.347458_g26592_i0 PRJNA168635 27008 167 1.347458 2.25025486 Spizellomyces 4815 Fungi Fungi 58.2 4.78e-8   NR TPX67414.1 117820 g26592 i0 48.1 1.94011976047904 54 28 97 0 3 164 381 434 TPX67414.1 hypothetical protein SpCBS45565_g03792 [Spizellomyces sp. 'palustris'] diamond 324 58.2 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces sp. 'palustris'
31116306 31116306 PRJNA168635_P_NODE_18575_length_187_cov_2.478261_g18159_i0 PRJNA168635 18575 187 2.478261 4.63434807 Batrachochytrium salamandrivorans 1357716 Fungi Fungi 48.5 1.6e-4   NR KAH6561349.1 1357716 g18159 i0 52.2 0.737967914438503 46 21 73.8 1 47 184 26 70 KAH6561349.1 hypothetical protein BASA62_009876 [Batrachochytrium salamandrivorans] diamond 138 48.5 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium salamandrivorans
31355822 31355822 PRJNA168635_P_NODE_14916_length_208_cov_2.515723_g14500_i0 PRJNA168635 14916 208 2.515723 5.23270384 root 1 Root_unresolved Root_unresolved 55.5 2.28e-7   NR KAJ3045844.1 64517 g14500 i0 49.2 1.70192307692308 63 31 90.9 1 207 19 96 157 KAJ3045844.1 Histone H2AX [Rhizophlyctis rosea] diamond 354 55.8 0.99462365591397806 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
31464622 31464622 PRJNA168635_P_NODE_32116_length_162_cov_0.920354_g31700_i0 PRJNA168635 32116 162 0.920354 1.49097348 Zopfochytrium polystomum 2211651 Fungi Fungi 66.2 5.9e-11   NR KAI9343744.1 2211651 g31700 i0 53.8 0.962962962962963 52 24 96.3 0 2 157 133 184 KAI9343744.1 U-box domain-containing protein [Zopfochytrium polystomum] diamond 156 66.2 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Zopfochytrium Zopfochytrium polystomum
31893366 31893366 PRJNA168635_P_NODE_8637_length_286_cov_4.565401_g8222_i0 PRJNA168635 8637 286 4.565401 13.05704686 Fungi 4751 Fungi Fungi 48.5 2.51e-5   NR TPX52929.1 109895 g8222 i0 65 2.55944055944056 40 14 42 0 280 161 7 46 TPX52929.1 hypothetical protein PhCBS80983_g06409 [Powellomyces hirtus] diamond 732 48.9 0.991820040899796 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Powellomyces Powellomyces hirtus
31907202 31907202 PRJNA168635_P_NODE_29017_length_165_cov_0.896552_g28601_i0 PRJNA168635 29017 165 0.896552 1.4793108 Borealophlyctis nickersoniae 2735257 Fungi Fungi 42 0.0241   NR KAJ3281936.1 2735257 g28601 i0 39.6 1.94545454545455 53 28 96.4 1 164 6 146 194 KAJ3281936.1 protein disulfide-isomerase precursor [Borealophlyctis nickersoniae] diamond 321 42 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Borealophlyctidaceae Borealophlyctis Borealophlyctis nickersoniae
32115015 32115015 PRJNA168635_P_NODE_22498_length_175_cov_1.626984_g22082_i0 PRJNA168635 22498 175 1.626984 2.847222 Fungi 4751 Fungi Fungi 76.6 7.84e-16   NR KAJ3042725.1 64517 g22082 i0 67.2 10.68 58 18 99.4 1 174 1 13 69 KAJ3042725.1 40S ribosomal protein S23 [Rhizophlyctis rosea] diamond 1869 77 0.994805194805195 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;