RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

23 rows where analysis = "diamond", bioproject = "PRJNA168635" and tax_phylum = "Chlorophyta"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Chlorophyta · 23 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA168635 · 23 ✖

analysis 1

  • diamond · 23 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8017795 8017795 PRJNA168635_P_NODE_21007_length_179_cov_1.592308_g20591_i0 PRJNA168635 21007 179 1.592308 2.85023132 Boodlea composita 204414 Plants Plants 105 1.18e-24   NR ATZ81708.1 204414 g20591 i0 86.4 0.988826815642458 59 8 98.9 0 179 3 123 181 ATZ81708.1 ATP synthase CF1 alpha subunit [Boodlea composita] diamond 177 105 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Cladophorales Boodleaceae Boodlea Boodlea composita
22041137 22041137 PRJNA168635_P_NODE_25698_length_169_cov_0.866667_g25282_i0 PRJNA168635 25698 169 0.866667 1.46466723 Monoraphidium minutum 39955 Plants Plants 110 7.16e-27   NR KAI8472570.1 39955 g25282 i0 85.7 0.994082840236686 56 8 99.4 0 169 2 241 296 KAI8472570.1 MAG: fatty acid desaturase-domain-containing protein [Monoraphidium minutum] diamond 168 110 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium minutum
26598765 26598765 PRJNA168635_P_NODE_24981_length_169_cov_1.925000_g24565_i0 PRJNA168635 24981 169 1.925 3.25325 Scenedesmus sp. NREL 46B-D3 2650976 Plants Plants 48.9 8.49e-5   NR KAF6259083.1 2650976 g24565 i0 88.9 0.479289940828402 27 3 47.9 0 82 2 24 50 KAF6259083.1 20S proteasome beta subunit A2 [Scenedesmus sp. NREL 46B-D3] diamond 81 48.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. NREL 46B-D3
26616903 26616903 PRJNA168635_P_NODE_32821_length_160_cov_2.765766_g32405_i0 PRJNA168635 32821 160 2.765766 4.4252256 Scenedesmaceae 3086 Plants Plants 42.7 0.0125   NR WIA28924.1 3088 g32405 i0 69.6 1.725 23 7 43.1 0 4 72 155 177 WIA28924.1 hypothetical protein OEZ86_011448 [Tetradesmus obliquus] diamond 276 42.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
26947257 26947257 PRJNA168635_P_NODE_17682_length_191_cov_0.929577_g17266_i0 PRJNA168635 17682 191 0.929577 1.77549207 Desmodesmus abundans 77547 Plants Plants 55.1 8.3e-7   NR YP_010488907.1 77547 g17266 i0 78.8 0.518324607329843 33 7 51.8 0 1 99 405 437 YP_010488907.1 beta subunit of RNA polymerase [Desmodesmus abundans] diamond 99 55.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Desmodesmus Desmodesmus abundans
27073875 27073875 PRJNA168635_P_NODE_26682_length_167_cov_3.923729_g26266_i0 PRJNA168635 26682 167 3.923729 6.55262743 Volvox carteri f. nagariensis 3068 Plants Plants 46.2 7.07e-5   NR EFJ38983.1 3068 g26266 i0 53.2 0.844311377245509 47 16 84.4 1 142 2 19 59 EFJ38983.1 hypothetical protein VOLCADRAFT_72080 [Volvox carteri f. nagariensis] diamond 141 46.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
27231928 27231928 PRJNA168635_P_NODE_30623_length_163_cov_1.780702_g30207_i0 PRJNA168635 30623 163 1.780702 2.90254426 Tetradesmus obliquus 3088 Plants Plants 41.2 0.0436   NR WIA32274.1 3088 g30207 i0 54.5 0.809815950920245 44 20 81 0 21 152 634 677 WIA32274.1 hypothetical protein OEZ86_003120 [Tetradesmus obliquus] diamond 132 41.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
27263667 27263667 PRJNA168635_P_NODE_31563_length_162_cov_2.292035_g31147_i0 PRJNA168635 31563 162 2.292035 3.7130967 Cymbomonas tetramitiformis 36881 Plants Plants 46.6 5.58e-4   NR KAK3240500.1 36881 g31147 i0 44.7 0.87037037037037 47 26 87 0 1 141 606 652 KAK3240500.1 hypothetical protein CYMTET_49658 [Cymbomonas tetramitiformis] diamond 141 46.6 1 Eukaryota   Viridiplantae Chlorophyta Pyramimonadophyceae Pyramimonadales Pyramimonadaceae Cymbomonas Cymbomonas tetramitiformis
27881372 27881372 PRJNA168635_P_NODE_35225_length_152_cov_2.990291_g34809_i0 PRJNA168635 35225 152 2.990291 4.54524232 Eukaryota 2759 Plants Plants 66.6 4e-11   NR GFR50614.1 47775 g34809 i0 72.1 6.39473684210526 43 12 84.9 0 2 130 4083 4125 GFR50614.1 hypothetical protein Agub_g12697 [Astrephomene gubernaculifera] diamond 972 67 0.994029850746269 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Astrephomenaceae Astrephomene Astrephomene gubernaculifera
28210731 28210731 PRJNA168635_P_NODE_21646_length_177_cov_2.250000_g21230_i0 PRJNA168635 21646 177 2.25 3.9825 Tetradesmus obliquus 3088 Plants Plants 53.1 3.23e-6   NR WIA44526.1 3088 g21230 i0 48.3 3.05084745762712 60 28 98.3 3 175 2 559 617 WIA44526.1 hypothetical protein OEZ86_007261 [Tetradesmus obliquus] diamond 540 53.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
28210732 28210732 PRJNA168635_P_NODE_22646_length_175_cov_0.865079_g22230_i0 PRJNA168635 22646 175 0.865079 1.51388825 Chlorella desiccata (nom. nud.) 1650286 Plants Plants 56.2 2.32e-7   NR KAL4521567.1 1650286 g22230 i0 40.7 1.85142857142857 54 32 92.6 0 2 163 150 203 KAL4521567.1 hypothetical protein Ndes2526A_g01761 [Chlorella desiccata (nom. nud.)] diamond 324 56.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Nannochloris Nannochloris sp. 'desiccata'
28463674 28463674 PRJNA168635_P_NODE_29726_length_164_cov_1.304348_g29310_i0 PRJNA168635 29726 164 1.304348 2.13913072 Scenedesmus sp. NREL 46B-D3 2650976 Plants Plants 105 3.1500000000000004e-27   NR KAF6258888.1 2650976 g29310 i0 92.3 0.951219512195122 52 4 95.1 0 159 4 52 103 KAF6258888.1 hypothetical protein COO60DRAFT_1076716 [Scenedesmus sp. NREL 46B-D3] diamond 156 105 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. NREL 46B-D3
29315995 29315995 PRJNA168635_P_NODE_25629_length_169_cov_0.866667_g25213_i0 PRJNA168635 25629 169 0.866667 1.46466723 Haematococcus lacustris 44745 Plants Plants 82 2.28e-17   NR KAJ9530304.1 44745 g25213 i0 74.5 2.71597633136095 51 13 90.5 0 15 167 3 53 KAJ9530304.1 hypothetical protein QJQ45_023593 [Haematococcus lacustris] diamond 459 82 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
29347644 29347644 PRJNA168635_P_NODE_11969_length_236_cov_5.080214_g11553_i0 PRJNA168635 11969 236 5.080214 11.98930504 Tupiella akineta 160070 Plants Plants 84.7 9.33e-18   NR YP_025752.1 160070 g11553 i0 55.6 0.915254237288136 72 32 91.5 0 20 235 40 111 YP_025752.1 putative site-specific DNA endonuclease [Tupiella akineta] diamond 216 84.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulotrichales Tupiellaceae Tupiella Tupiella akineta
29694565 29694565 PRJNA168635_P_NODE_31170_length_163_cov_0.912281_g30754_i0 PRJNA168635 31170 163 0.912281 1.48701803 Tetradesmus obliquus 3088 Plants Plants 53.5 1.98e-6   NR WIA20858.1 3088 g30754 i0 60.9 0.846625766871166 46 18 84.7 0 162 25 899 944 WIA20858.1 hypothetical protein OEZ85_005207 [Tetradesmus obliquus] diamond 138 53.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
30059984 30059984 PRJNA168635_P_NODE_20651_length_180_cov_2.000000_g20235_i0 PRJNA168635 20651 180 2 3.6 Scenedesmaceae 3086 Plants Plants 82 2.23e-16   NR WIA35511.1 3088 g20235 i0 84 3.33333333333333 50 8 83.3 0 178 29 548 597 WIA35511.1 hypothetical protein OEZ86_003938 [Tetradesmus obliquus] diamond 600 82 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
30408002 30408002 PRJNA168635_P_NODE_28073_length_166_cov_0.888889_g27657_i0 PRJNA168635 28073 166 0.888889 1.47555574 root 1 Root_unresolved Root_unresolved 52.4 1.24e-6   NR KAK9915632.1 248742 g27657 i0 79.3 47.4939759036145 29 6 52.4 0 151 65 59 87 KAK9915632.1 hypothetical protein WJX75_001796 [Coccomyxa subellipsoidea] diamond 7884 52.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
31924969 31924969 PRJNA168635_P_NODE_22937_length_174_cov_1.632000_g22521_i0 PRJNA168635 22937 174 1.632 2.83968 Chlorophyta 3041 Plants Plants 42.7 0.0149   NR WIA32710.1 3088 g22521 i0 42.3 2.36206896551724 52 28 86.2 2 173 24 354 405 WIA32710.1 hypothetical protein OEZ86_005896 [Tetradesmus obliquus] diamond 411 43.1 0.990719257540603 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
31938717 31938717 PRJNA168635_P_NODE_29517_length_164_cov_2.356522_g29101_i0 PRJNA168635 29517 164 2.356522 3.86469608 Chloropicon roscoffensis 1461544 Plants Plants 59.3 1.82e-8   NR WZN66030.1 1461544 g29101 i0 54.5 3.14634146341463 44 20 80.5 0 27 158 2213 2256 WZN66030.1 fibrocystin-L [Chloropicon roscoffensis] diamond 516 59.3 1 Eukaryota   Viridiplantae Chlorophyta Chloropicophyceae Chloropicales Chloropicaceae Chloropicon Chloropicon roscoffensis
31988247 31988247 PRJNA168635_P_NODE_16478_length_197_cov_2.358108_g16062_i0 PRJNA168635 16478 197 2.358108 4.64547276 root 1 Root_unresolved Root_unresolved 79.3 3.55e-17   NR CAG9460618.1 765719 g16062 i0 58.5 14.5736040609137 53 22 80.7 0 168 10 41 93 CAG9460618.1 unnamed protein product [Pedinophyceae sp. YPF-701] diamond 2871 80.1 0.990012484394507 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae       Pedinophyceae sp. YPF-701
32413566 32413566 PRJNA168635_P_NODE_23379_length_173_cov_1.508065_g22963_i0 PRJNA168635 23379 173 1.508065 2.60895245 Cymbomonas tetramitiformis 36881 Plants Plants 48.9 9.64e-5   NR KAK3266388.1 36881 g22963 i0 51.1 0.815028901734104 47 21 78 1 2 136 401 447 KAK3266388.1 hypothetical protein CYMTET_24994 [Cymbomonas tetramitiformis] diamond 141 48.9 1 Eukaryota   Viridiplantae Chlorophyta Pyramimonadophyceae Pyramimonadales Pyramimonadaceae Cymbomonas Cymbomonas tetramitiformis
32413568 32413568 PRJNA168635_P_NODE_26479_length_168_cov_0.873950_g26063_i0 PRJNA168635 26479 168 0.87395 1.468236 Scenedesmus sp. NREL 46B-D3 2650976 Plants Plants 44.3 0.002   NR KAF6253997.1 2650976 g26063 i0 95 0.714285714285714 20 1 35.7 0 166 107 134 153 KAF6253997.1 ribosomal protein S19 component of cytosolic 80S ribosome and 40S small subunit [Scenedesmus sp. NREL 46B-D3] diamond 120 44.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. NREL 46B-D3
32854932 32854932 PRJNA168635_P_NODE_34740_length_154_cov_2.219048_g34324_i0 PRJNA168635 34740 154 2.219048 3.41733392 Tetradesmus obliquus 3088 Plants Plants 63.5 5.06e-10   NR WIA19769.1 3088 g34324 i0 64.2 2.02597402597403 53 16 97.4 1 154 5 319 371 WIA19769.1 hypothetical protein OEZ85_005683 [Tetradesmus obliquus] diamond 312 63.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;