contig_metadata
10 rows where analysis = "diamond", bioproject = "PRJNA168635" and tax_phylum = "Chlamydiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3604694 | 3604694 | PRJNA168635_P_NODE_23943_length_171_cov_7.360656_g23527_i0 | PRJNA168635 | 23943 | 171 | 7.360656 | 12.58672176 | Candidatus Rhabdochlamydia sp. | 2320511 | Bacteria | Bacteria | 101 | 3.5399999999999995e-23 | NR | MFI0478845.1 | 2320511 | g23527 | i0 | 96.4 | 0.964912280701754 | 55 | 2 | 96.5 | 0 | 165 | 1 | 102 | 156 | MFI0478845.1 hypothetical protein [Candidatus Rhabdochlamydia sp.] | diamond | 165 | 101 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Rhabdochlamydiaceae | Candidatus Rhabdochlamydia | Candidatus Rhabdochlamydia sp. | |
| 27073879 | 27073879 | PRJNA168635_P_NODE_31102_length_163_cov_0.912281_g30686_i0 | PRJNA168635 | 31102 | 163 | 0.912281 | 1.48701803 | Parachlamydiales bacterium | 2052178 | Bacteria | Bacteria | 47 | 4.09e-4 | NR | MBX7065685.1 | 2052178 | g30686 | i0 | 38.9 | 0.993865030674847 | 54 | 26 | 86.5 | 1 | 2 | 142 | 406 | 459 | MBX7065685.1 translocation/assembly module TamB domain-containing protein [Parachlamydiales bacterium] | diamond | 162 | 47 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiales bacterium | |||
| 27597392 | 27597392 | PRJNA168635_P_NODE_27544_length_166_cov_22.700855_g27128_i0 | PRJNA168635 | 27544 | 166 | 22.700855 | 37.6834193 | PVC group | 1783257 | Bacteria | Bacteria | 46.2 | 2.43e-4 | NR | pir|E81737| | 83560 | g27128 | i0 | 52.4 | 2.33132530120482 | 42 | 20 | 75.9 | 0 | 38 | 163 | 25 | 66 | pir|E81737| hypothetical protein TC0128 [imported] - Chlamydia muridarum (strain Nigg) [Chlamydia muridarum] | diamond | 387 | 46.6 | 0.991416309012876 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiaceae | Chlamydia | Chlamydia muridarum | |
| 27863495 | 27863495 | PRJNA168635_P_NODE_20725_length_180_cov_1.557252_g20309_i0 | PRJNA168635 | 20725 | 180 | 1.557252 | 2.8030536 | Parachlamydia sp. AcF125 | 2795736 | Bacteria | Bacteria | 48.1 | 1.72e-4 | NR | WP_213157004.1 | 2795736 | g20309 | i0 | 72.4 | 1.03333333333333 | 29 | 8 | 48.3 | 0 | 158 | 72 | 220 | 248 | WP_213157004.1 glycosyltransferase family 2 protein [Parachlamydia sp. AcF125] | diamond | 186 | 48.1 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydia | Parachlamydia sp. AcF125 | |
| 28905268 | 28905268 | PRJNA168635_P_NODE_17888_length_190_cov_1.304965_g17472_i0 | PRJNA168635 | 17888 | 190 | 1.304965 | 2.4794335 | Rhabdochlamydiaceae bacterium | 2047756 | Bacteria | Bacteria | 98.6 | 3.53e-22 | NR | MFS8563298.1 | 2047756 | g17472 | i0 | 72.6 | 0.978947368421053 | 62 | 17 | 97.9 | 0 | 188 | 3 | 84 | 145 | MFS8563298.1 NAD-dependent DNA ligase LigA [Rhabdochlamydiaceae bacterium] | diamond | 186 | 98.6 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Rhabdochlamydiaceae | Rhabdochlamydiaceae bacterium | ||
| 29347647 | 29347647 | PRJNA168635_P_NODE_21729_length_177_cov_1.601562_g21313_i0 | PRJNA168635 | 21729 | 177 | 1.601562 | 2.83476474 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 70.9 | 1.4e-13 | NR | MCP5470420.1 | 2047757 | g21313 | i0 | 51.7 | 1.96610169491525 | 58 | 28 | 98.3 | 0 | 3 | 176 | 2 | 59 | MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium] | diamond | 348 | 70.9 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 29505332 | 29505332 | PRJNA168635_P_NODE_30810_length_163_cov_0.912281_g30394_i0 | PRJNA168635 | 30810 | 163 | 0.912281 | 1.48701803 | Waddliaceae bacterium | 2026802 | Bacteria | Bacteria | 68.6 | 9.93e-12 | NR | HEY4832570.1 | 2026802 | g30394 | i0 | 53.7 | 1.98773006134969 | 54 | 25 | 99.4 | 0 | 163 | 2 | 426 | 479 | HEY4832570.1 alpha/beta hydrolase [Waddliaceae bacterium] | diamond | 324 | 68.6 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Waddliaceae | Waddliaceae bacterium | ||
| 30295493 | 30295493 | PRJNA168635_P_NODE_30892_length_163_cov_0.912281_g30476_i0 | PRJNA168635 | 30892 | 163 | 0.912281 | 1.48701803 | Rhabdochlamydiaceae bacterium | 2047756 | Bacteria | Bacteria | 67.8 | 1.34e-11 | NR | HEY2810543.1 | 2047756 | g30476 | i0 | 72 | 0.920245398773006 | 50 | 14 | 92 | 0 | 12 | 161 | 131 | 180 | HEY2810543.1 hypothetical protein [Rhabdochlamydiaceae bacterium] | diamond | 150 | 67.8 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Rhabdochlamydiaceae | Rhabdochlamydiaceae bacterium | ||
| 32508653 | 32508653 | PRJNA168635_P_NODE_24119_length_171_cov_1.934426_g23703_i0 | PRJNA168635 | 24119 | 171 | 1.934426 | 3.30786846 | Parachlamydia acanthamoebae str. Hall's coccus | 159254 | Bacteria | Bacteria | 55.1 | 2.3e-7 | NR | EFB40215.1 | 159254 | g23703 | i0 | 61 | 1.03508771929825 | 59 | 20 | 100 | 2 | 171 | 1 | 24 | 81 | EFB40215.1 hypothetical protein pah_c222o002 [Parachlamydia acanthamoebae str. Hall's coccus] | diamond | 177 | 55.1 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydia | Parachlamydia acanthamoebae | |
| 32634346 | 32634346 | PRJNA168635_P_NODE_19880_length_183_cov_1.223881_g19464_i0 | PRJNA168635 | 19880 | 183 | 1.223881 | 2.23970223 | Candidatus Rhabdochlamydia sp. | 2320511 | Bacteria | Bacteria | 107 | 3.78e-25 | NR | MFI0478845.1 | 2320511 | g19464 | i0 | 98.3 | 0.983606557377049 | 60 | 1 | 98.4 | 0 | 182 | 3 | 532 | 591 | MFI0478845.1 hypothetical protein [Candidatus Rhabdochlamydia sp.] | diamond | 180 | 107 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Rhabdochlamydiaceae | Candidatus Rhabdochlamydia | Candidatus Rhabdochlamydia sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;