RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA168635" and tax_phylum = "Candidatus Woeseibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Woeseibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA168635 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28828473 28828473 PRJNA168635_P_NODE_22748_length_174_cov_3.368000_g22332_i0 PRJNA168635 22748 174 3.368 5.86032 Bacteria 2 Bacteria Bacteria 59.7 1.5e-8   NR KKQ94898.1 1618548 g22332 i0 62.8 1.46551724137931 43 16 74.1 0 173 45 489 531 KKQ94898.1 MAG: hypothetical protein UT21_C0011G0006 [Candidatus Woesebacteria bacterium GW2011_GWA1_39_11b] diamond 255 59.7 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium GW2011_GWA1_39_11b
32350382 32350382 PRJNA168635_P_NODE_18059_length_189_cov_2.035714_g17643_i0 PRJNA168635 18059 189 2.035714 3.84749946 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 42.4 0.0245   NR MBP6045381.1 2026804 g17643 i0 56.7 0.476190476190476 30 13 47.6 0 99 188 308 337 MBP6045381.1 hypothetical protein [Candidatus Woesebacteria bacterium] diamond 90 42.4 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;