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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA168635" and tax_phylum = "Candidatus Parcubacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Parcubacteria · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA168635 · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26725310 26725310 PRJNA168635_P_NODE_23801_length_172_cov_1.536585_g23385_i0 PRJNA168635 23801 172 1.536585 2.6429262 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 99.4 1.6700000000000001e-22   NR MEY4731727.1 2762014 g23385 i0 86 0.994186046511628 57 8 99.4 0 1 171 584 640 MEY4731727.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 171 99.4 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
28273916 28273916 PRJNA168635_P_NODE_29166_length_165_cov_0.896552_g28750_i0 PRJNA168635 29166 165 0.896552 1.4793108 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 74.7 6.09e-14   NR MCG2685873.1 2762014 g28750 i0 63 1.96363636363636 54 20 98.2 0 3 164 152 205 MCG2685873.1 DNA polymerase III subunit gamma/tau [Candidatus Parcubacteria bacterium] diamond 324 74.7 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
28337226 28337226 PRJNA168635_P_NODE_27746_length_166_cov_1.760684_g27330_i0 PRJNA168635 27746 166 1.760684 2.92273544 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 93.2 9.98e-21   NR MEA2715371.1 2762014 g27330 i0 77.8 2.85542168674699 54 12 97.6 0 5 166 38 91 MEA2715371.1 cysteinyl-tRNA synthetase [Candidatus Parcubacteria bacterium] diamond 474 93.2 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
29473587 29473587 PRJNA168635_P_NODE_17850_length_190_cov_1.460993_g17434_i0 PRJNA168635 17850 190 1.460993 2.7758867 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 42.4 0.0249   NR RJQ33899.1 2762014 g17434 i0 47.1 0.805263157894737 51 27 80.5 0 30 182 551 601 RJQ33899.1 MAG: hypothetical protein C4568_03800 [Candidatus Parcubacteria bacterium] diamond 153 42.4 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
29694566 29694566 PRJNA168635_P_NODE_31910_length_162_cov_0.920354_g31494_i0 PRJNA168635 31910 162 0.920354 1.49097348 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 47.4 1.65e-4   NR MCK5061739.1 2762014 g31494 i0 44.4 1 54 26 92.6 1 9 158 68 121 MCK5061739.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 162 47.4 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
29820957 29820957 PRJNA168635_P_NODE_34691_length_154_cov_2.590476_g34275_i0 PRJNA168635 34691 154 2.590476 3.98933304 Parcubacteria bacterium C7867- 2762014 Bacteria Bacteria 70.9 1.28e-12   NR KND48200.1 1659200 g34275 i0 97.1 0.662337662337662 34 1 66.2 0 1 102 43 76 KND48200.1 MAG: threonine--tRNA ligase [Parcubacteria bacterium C7867-006] diamond 102 70.9 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Parcubacteria bacterium C7867-006
30010881 30010881 PRJNA168635_P_NODE_26531_length_168_cov_0.873950_g26115_i0 PRJNA168635 26531 168 0.87395 1.468236 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 106 4.3e-25   NR MBX4209607.1 2762014 g26115 i0 78.6 3 56 12 100 0 1 168 47 102 MBX4209607.1 O-antigen ligase family protein [Candidatus Parcubacteria bacterium] diamond 504 106 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
30990331 30990331 PRJNA168635_P_NODE_26174_length_168_cov_0.873950_g25758_i0 PRJNA168635 26174 168 0.87395 1.468236 Parcubacteria bacterium C7867- 2762014 Bacteria Bacteria 84.7 2.13e-17   NR KND48325.1 1659197 g25758 i0 73.6 1.85714285714286 53 14 94.6 0 160 2 2138 2190 KND48325.1 MAG: hypothetical protein AB198_01235, partial [Parcubacteria bacterium C7867-003] diamond 312 84.7 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Parcubacteria bacterium C7867-003
32033810 32033810 PRJNA168635_P_NODE_13818_length_217_cov_7.505952_g13402_i0 PRJNA168635 13818 217 7.505952 16.28791584 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 121 1.04e-32   NR MEN9412989.1 2762014 g13402 i0 83.1 0.981566820276498 71 12 98.2 0 215 3 12 82 MEN9412989.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 213 121 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;