RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA168635" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA168635 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27358562 27358562 PRJNA168635_P_NODE_19563_length_184_cov_1.207407_g19147_i0 PRJNA168635 19563 184 1.207407 2.22162888 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 47.4 3.95e-5   NR HOX54630.1 2035772 g19147 i0 43.1 0.945652173913043 58 32 92.9 1 12 182 12 69 HOX54630.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 174 47.4 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28891578 28891578 PRJNA168635_P_NODE_20028_length_182_cov_1.962406_g19612_i0 PRJNA168635 20028 182 1.962406 3.57157892 Bacteria 2 Bacteria Bacteria 64.3 2.6e-10   NR HXV18499.1 2035772 g19612 i0 93.9 10.3351648351648 33 2 54.4 0 181 83 221 253 HXV18499.1 acetyl-CoA carboxylase, carboxyltransferase subunit beta [Candidatus Omnitrophota bacterium] diamond 1881 64.3 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30105418 30105418 PRJNA168635_P_NODE_34712_length_154_cov_2.466667_g34296_i0 PRJNA168635 34712 154 2.466667 3.79866718 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 47 3.31e-4   NR MFH1442264.1 2035772 g34296 i0 42.6 2.78571428571429 47 27 91.6 0 1 141 205 251 MFH1442264.1 nucleotidyltransferase domain-containing protein [Candidatus Omnitrophota bacterium] diamond 429 47 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
31717408 31717408 PRJNA168635_P_NODE_23297_length_173_cov_1.669355_g22881_i0 PRJNA168635 23297 173 1.669355 2.88798415 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 105 5.83e-25   NR MBP9733525.1 2035772 g22881 i0 89.5 0.988439306358382 57 6 98.8 0 173 3 145 201 MBP9733525.1 HD domain-containing protein [Candidatus Omnitrophota bacterium] diamond 171 105 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;