RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA168635" and tax_phylum = "Candidatus Kapaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA168635 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27200118 27200118 PRJNA168635_P_NODE_24982_length_169_cov_1.916667_g24566_i0 PRJNA168635 24982 169 1.916667 3.23916723 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 97.1 8.47e-22   NR MFI5263396.1 2447898 g24566 i0 78.2 1.95266272189349 55 12 97.6 0 167 3 335 389 MFI5263396.1 apolipoprotein N-acyltransferase [Candidatus Kapaibacterium sp.] diamond 330 97.1 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
27263665 27263665 PRJNA168635_P_NODE_30643_length_163_cov_1.692982_g30227_i0 PRJNA168635 30643 163 1.692982 2.75956066 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 50.4 2.19e-5   NR GIV49793.1 2447898 g30227 i0 40 6.07361963190184 55 32 99.4 1 2 163 143 197 GIV49793.1 MAG: hypothetical protein KatS3mg038_0314 [Candidatus Kapaibacterium sp.] diamond 990 50.4 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
27516269 27516269 PRJNA168635_P_NODE_24743_length_170_cov_1.190083_g24327_i0 PRJNA168635 24743 170 1.190083 2.0231411 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 57 1.28e-7   NR HET6400341.1 2447898 g24327 i0 63.6 0.776470588235294 44 16 77.6 0 1 132 182 225 HET6400341.1 hypothetical protein [Candidatus Kapaibacterium sp.] diamond 132 57 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
28495234 28495234 PRJNA168635_P_NODE_30927_length_163_cov_0.912281_g30511_i0 PRJNA168635 30927 163 0.912281 1.48701803 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 102 1.2e-23   NR HEY6171332.1 2447898 g30511 i0 90.6 6.80981595092025 53 5 97.5 0 3 161 343 395 HEY6171332.1 ATP-dependent protease ATPase subunit HslU [Candidatus Kapaibacterium sp.] diamond 1110 102 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;