RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA168635" and tax_phylum = "Candidatus Falkowiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Falkowiibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA168635 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29221464 29221464 PRJNA168635_P_NODE_19269_length_185_cov_1.308824_g18853_i0 PRJNA168635 19269 185 1.308824 2.4213244 Candidatus Falkowbacteria bacterium 2053554 Bacteria Bacteria 83.2 9.51e-17   NR NCN25901.1 2053554 g18853 i0 63.9 0.989189189189189 61 22 98.9 0 183 1 258 318 NCN25901.1 LysM peptidoglycan-binding domain-containing protein [Candidatus Falkowbacteria bacterium] diamond 183 83.2 1 Bacteria Bacteria candidate phyla   Candidatus Falkowiibacteriota         Candidatus Falkowbacteria bacterium
29505331 29505331 PRJNA168635_P_NODE_28210_length_166_cov_0.888889_g27794_i0 PRJNA168635 28210 166 0.888889 1.47555574 Candidatus Falkowbacteria bacterium 2053554 Bacteria Bacteria 69.7 3.73e-12   NR MBT5503381.1 2053554 g27794 i0 60.4 0.957831325301205 53 21 95.8 0 6 164 315 367 MBT5503381.1 phage major capsid protein [Candidatus Falkowbacteria bacterium] diamond 159 69.7 1 Bacteria Bacteria candidate phyla   Candidatus Falkowiibacteriota         Candidatus Falkowbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;