RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA168635" and tax_phylum = "Candidatus Absconditibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Absconditibacteriota · 11 ✖

tax_clade 1

bioproject 1

  • PRJNA168635 · 11 ✖

analysis 1

  • diamond · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27390174 27390174 PRJNA168635_P_NODE_24303_length_171_cov_1.303279_g23887_i0 PRJNA168635 24303 171 1.303279 2.22860709 Candidatus Absconditabacterales bacterium 2927939 Bacteria Bacteria 95.5 3.56e-21   NR HMS91176.1 2927939 g23887 i0 81.8 1.92982456140351 55 10 96.5 0 3 167 444 498 HMS91176.1 portal protein [Candidatus Absconditabacterales bacterium] diamond 330 95.5 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota   Candidatus Absconditabacterales     Candidatus Absconditabacterales bacterium
27958336 27958336 PRJNA168635_P_NODE_29425_length_164_cov_3.730435_g29009_i0 PRJNA168635 29425 164 3.730435 6.1179134 Candidatus Absconditabacterales bacterium 2927939 Bacteria Bacteria 102 3.03e-25   NR HNG97599.1 2927939 g29009 i0 100 0.969512195121951 53 0 97 0 163 5 130 182 HNG97599.1 hypothetical protein [Candidatus Absconditabacterales bacterium] diamond 159 102 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota   Candidatus Absconditabacterales     Candidatus Absconditabacterales bacterium
30073763 30073763 PRJNA168635_P_NODE_18032_length_189_cov_2.378571_g17616_i0 PRJNA168635 18032 189 2.378571 4.49549919 Candidatus Absconditabacterales bacterium 2927939 Bacteria Bacteria 90.1 3.79e-19   NR HNG96687.1 2927939 g17616 i0 83.9 0.888888888888889 56 9 88.9 0 1 168 578 633 HNG96687.1 hypothetical protein [Candidatus Absconditabacterales bacterium] diamond 168 90.1 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota   Candidatus Absconditabacterales     Candidatus Absconditabacterales bacterium
30136729 30136729 PRJNA168635_P_NODE_33112_length_159_cov_2.763636_g32696_i0 PRJNA168635 33112 159 2.763636 4.39418124 candidate division SR1 bacterium Aalborg_AAW-1 1643353 Bacteria Bacteria 59.7 4.36e-9   NR AKH32956.1 1643353 g32696 i0 78.8 0.622641509433962 33 7 62.3 0 159 61 110 142 AKH32956.1 Ribosomal RNA small subunit methyltransferase G [candidate division SR1 bacterium Aalborg_AAW-1] diamond 99 59.7 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium Aalborg_AAW-1
30610909 30610909 PRJNA168635_P_NODE_18153_length_189_cov_1.257143_g17737_i0 PRJNA168635 18153 189 1.257143 2.37600027 candidate division SR1 bacterium Aalborg_AAW-1 1643353 Bacteria Bacteria 51.2 1.81e-5   NR AKH33351.1 1643353 g17737 i0 51.2 0.682539682539683 43 21 68.3 0 188 60 328 370 AKH33351.1 DNA primase [candidate division SR1 bacterium Aalborg_AAW-1] diamond 129 51.2 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium Aalborg_AAW-1
31274568 31274568 PRJNA168635_P_NODE_25895_length_168_cov_2.000000_g25479_i0 PRJNA168635 25895 168 2 3.36 Candidatus Absconditabacterales bacterium 2927939 Bacteria Bacteria 94.7 3.39e-22   NR HNG96755.1 2927939 g25479 i0 94 0.892857142857143 50 3 89.3 0 158 9 186 235 HNG96755.1 hypothetical protein [Candidatus Absconditabacterales bacterium] diamond 150 94.7 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota   Candidatus Absconditabacterales     Candidatus Absconditabacterales bacterium
31464613 31464613 PRJNA168635_P_NODE_23256_length_173_cov_2.104839_g22840_i0 PRJNA168635 23256 173 2.104839 3.64137147 Candidatus Absconditabacterales bacterium 2927939 Bacteria Bacteria 93.2 9.62e-22   NR HNG97599.1 2927939 g22840 i0 87 0.936416184971098 54 7 93.6 0 3 164 26 79 HNG97599.1 hypothetical protein [Candidatus Absconditabacterales bacterium] diamond 162 93.2 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota   Candidatus Absconditabacterales     Candidatus Absconditabacterales bacterium
32192077 32192077 PRJNA168635_P_NODE_23298_length_173_cov_1.669355_g22882_i0 PRJNA168635 23298 173 1.669355 2.88798415 candidate division SR1 bacterium Aalborg_AAW-1 1643353 Bacteria Bacteria 89 3.61e-19   NR AKH32493.1 1643353 g22882 i0 75.4 0.988439306358382 57 14 98.8 0 1 171 95 151 AKH32493.1 Putative type II secretion system protein F [candidate division SR1 bacterium Aalborg_AAW-1] diamond 171 89 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium Aalborg_AAW-1
32381895 32381895 PRJNA168635_P_NODE_33399_length_158_cov_2.623853_g32983_i0 PRJNA168635 33399 158 2.623853 4.14568774 Candidatus Absconditabacterales bacterium 2927939 Bacteria Bacteria 100 1.11e-24   NR HNG97599.1 2927939 g32983 i0 100 0.987341772151899 52 0 98.7 0 158 3 127 178 HNG97599.1 hypothetical protein [Candidatus Absconditabacterales bacterium] diamond 156 100 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota   Candidatus Absconditabacterales     Candidatus Absconditabacterales bacterium
32540274 32540274 PRJNA168635_P_NODE_32819_length_160_cov_2.765766_g32403_i0 PRJNA168635 32819 160 2.765766 4.4252256 Candidatus Absconditabacterales bacterium 2927939 Bacteria Bacteria 71.6 7.19e-14   NR HNG97243.1 2927939 g32403 i0 100 0.6375 34 0 63.8 0 2 103 116 149 HNG97243.1 hypothetical protein [Candidatus Absconditabacterales bacterium] diamond 102 71.6 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota   Candidatus Absconditabacterales     Candidatus Absconditabacterales bacterium
32886333 32886333 PRJNA168635_P_NODE_24200_length_171_cov_1.680328_g23784_i0 PRJNA168635 24200 171 1.680328 2.87336088 candidate division SR1 bacterium Aalborg_AAW-1 1643353 Bacteria Bacteria 105 1.49e-24   NR AKH33109.1 1643353 g23784 i0 87.5 0.982456140350877 56 7 98.2 0 170 3 83 138 AKH33109.1 Polyribonucleotide nucleotidyltransferase [candidate division SR1 bacterium Aalborg_AAW-1] diamond 168 105 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium Aalborg_AAW-1

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;