RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA168635" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA168635 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27281501 27281501 PRJNA168635_P_NODE_35503_length_151_cov_4.009804_g35087_i0 PRJNA168635 35503 151 4.009804 6.05480404 Blastocladiales 4805 Fungi Fungi 61.6 2.33e-9   NR KAI9220476.1 64508 g35087 i0 64 15.8940397350993 50 18 99.3 0 150 1 3633 3682 KAI9220476.1 dynein heavy chain and region D6 of dynein motor-domain-containing protein [Blastocladiella britannica] diamond 2400 61.6 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
31418902 31418902 PRJNA168635_P_NODE_33896_length_156_cov_3.841121_g33480_i0 PRJNA168635 33896 156 3.841121 5.99214876 Blastocladiaceae 4806 Fungi Fungi 72.8 2.95e-13   NR KAI9221962.1 64508 g33480 i0 68.6 7.76923076923077 51 14 98.1 1 153 1 1161 1209 KAI9221962.1 chitin synthase-domain-containing protein [Blastocladiella britannica] diamond 1212 73.2 0.994535519125683 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;