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contig_metadata

31 rows where analysis = "diamond", bioproject = "PRJNA168635" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 31 ✖

tax_kingdom 1

bioproject 1

  • PRJNA168635 · 31 ✖

analysis 1

  • diamond · 31 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9292502 9292502 PRJNA168635_P_NODE_18528_length_187_cov_4.427536_g18112_i0 PRJNA168635 18528 187 4.427536 8.27949232 Armatimonas 1042315 Bacteria Bacteria 70.5 1.03e-13   NR WP_184192049.1 685828 g18112 i0 97.6 2.63101604278075 41 1 65.8 0 65 187 1 41 WP_184192049.1 competence type IV pilus major pilin ComGC [Armatimonas rosea] diamond 492 70.9 0.994358251057828 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas rosea
26598770 26598770 PRJNA168635_P_NODE_28121_length_166_cov_0.888889_g27705_i0 PRJNA168635 28121 166 0.888889 1.47555574 Armatimonas sp. 1872638 Bacteria Bacteria 89 1.91e-19   NR WP_395088493.1 1872638 g27705 i0 74.5 1.98795180722892 55 14 99.4 0 165 1 59 113 WP_395088493.1 aldo/keto reductase [Armatimonas sp.] diamond 330 89 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas sp.
26693987 26693987 PRJNA168635_P_NODE_20061_length_182_cov_1.556391_g19645_i0 PRJNA168635 20061 182 1.556391 2.83263162 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 82.4 1.72e-16   NR MCC7230147.1 2682144 g19645 i0 58.6 0.956043956043956 58 24 95.6 0 178 5 1125 1182 MCC7230147.1 hypothetical protein [Fimbriimonadaceae bacterium] diamond 174 82.4 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
27010505 27010505 PRJNA168635_P_NODE_25062_length_169_cov_1.700000_g24646_i0 PRJNA168635 25062 169 1.7 2.873 Armatimonadota bacterium 2033014 Bacteria Bacteria 39.7 0.0449   NR MBM3493283.1 2033014 g24646 i0 52.8 0.63905325443787 36 17 63.9 0 21 128 1 36 MBM3493283.1 hypothetical protein [Armatimonadota bacterium] diamond 108 39.7 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
27042318 27042318 PRJNA168635_P_NODE_24622_length_170_cov_1.694215_g24206_i0 PRJNA168635 24622 170 1.694215 2.8801655 Armatimonas rosea 685828 Bacteria Bacteria 88.6 6.87e-19   NR WP_184194070.1 685828 g24206 i0 70.4 1.90588235294118 54 16 95.3 0 163 2 1 54 WP_184194070.1 glycosyltransferase family 4 protein [Armatimonas rosea] diamond 324 88.6 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas rosea
27136698 27136698 PRJNA168635_P_NODE_30042_length_164_cov_0.904348_g29626_i0 PRJNA168635 30042 164 0.904348 1.48313072 Armatimonas rosea 685828 Bacteria Bacteria 111 6.94e-27   NR WP_184198448.1 685828 g29626 i0 94.3 0.969512195121951 53 3 97 0 5 163 516 568 WP_184198448.1 hypothetical protein [Armatimonas rosea] diamond 159 111 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas rosea
27231925 27231925 PRJNA168635_P_NODE_28563_length_165_cov_2.103448_g28147_i0 PRJNA168635 28563 165 2.103448 3.4706892 Armatimonas sp. 1872638 Bacteria Bacteria 41.2 0.0473   NR WP_309719534.1 1872638 g28147 i0 58.6 0.527272727272727 29 12 52.7 0 16 102 534 562 WP_309719534.1 S8 family serine peptidase [Armatimonas sp.] diamond 87 41.2 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas sp.
27358559 27358559 PRJNA168635_P_NODE_13123_length_224_cov_1.685714_g12707_i0 PRJNA168635 13123 224 1.685714 3.77599936 Armatimonas rosea 685828 Bacteria Bacteria 91.7 1.67e-19   NR WP_184198211.1 685828 g12707 i0 75 0.75 56 14 75 0 168 1 144 199 WP_184198211.1 S8 family peptidase [Armatimonas rosea] diamond 168 91.7 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas rosea
28052973 28052973 PRJNA168635_P_NODE_31965_length_162_cov_0.920354_g31549_i0 PRJNA168635 31965 162 0.920354 1.49097348 Fimbriimonas sp. 1936159 Bacteria Bacteria 62.8 1.01e-9   NR HWD40372.1 1936159 g31549 i0 70.2 0.87037037037037 47 14 87 0 143 3 151 197 HWD40372.1 hypothetical protein [Fimbriimonas sp.] diamond 141 62.8 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
28165624 28165624 PRJNA168635_P_NODE_14805_length_209_cov_2.393750_g14389_i0 PRJNA168635 14805 209 2.39375 5.0029375 Armatimonas 1042315 Bacteria Bacteria 126 6.759999999999999e-32   NR WP_184195473.1 685828 g14389 i0 97.1 1.98086124401914 69 2 99 0 209 3 19 87 WP_184195473.1 polysaccharide biosynthesis tyrosine autokinase [Armatimonas rosea] diamond 414 126 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas rosea
28179079 28179079 PRJNA168635_P_NODE_28606_length_165_cov_1.784483_g28190_i0 PRJNA168635 28606 165 1.784483 2.94439695 Capsulimonas sp. 2494211 Bacteria Bacteria 61.6 2.88e-9   NR WP_348222769.1 2494211 g28190 i0 45.3 0.963636363636364 53 29 96.4 0 162 4 293 345 WP_348222769.1 hypothetical protein [Capsulimonas sp.] diamond 159 61.6 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales Capsulimonadaceae Capsulimonas Capsulimonas sp.
28716188 28716188 PRJNA168635_P_NODE_33987_length_156_cov_2.850467_g33571_i0 PRJNA168635 33987 156 2.850467 4.44672852 Armatimonas sp. 1872638 Bacteria Bacteria 95.1 2.3e-21   NR WP_309694082.1 1872638 g33571 i0 98.1 1 52 1 100 0 1 156 226 277 WP_309694082.1 TolC family protein [Armatimonas sp.] diamond 156 95.1 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas sp.
29126811 29126811 PRJNA168635_P_NODE_19669_length_183_cov_3.671642_g19253_i0 PRJNA168635 19669 183 3.671642 6.71910486 Capsulimonas corticalis 2219043 Bacteria Bacteria 43.9 0.00655   NR WP_119319009.1 2219043 g19253 i0 44.2 1.70491803278689 52 29 85.2 0 167 12 676 727 WP_119319009.1 hypothetical protein [Capsulimonas corticalis] diamond 312 43.9 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales Capsulimonadaceae Capsulimonas Capsulimonas corticalis
29379182 29379182 PRJNA168635_P_NODE_22529_length_175_cov_1.619048_g22113_i0 PRJNA168635 22529 175 1.619048 2.833334 Armatimonadota bacterium 2033014 Bacteria Bacteria 45.8 0.00105   NR MEI7987022.1 2033014 g22113 i0 51.2 0.737142857142857 43 21 73.7 0 175 47 93 135 MEI7987022.1 hypothetical protein [Armatimonadota bacterium] diamond 129 45.8 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
29568530 29568530 PRJNA168635_P_NODE_26890_length_167_cov_1.737288_g26474_i0 PRJNA168635 26890 167 1.737288 2.90127096 Armatimonas sp. 1872638 Bacteria Bacteria 118 2.69e-29   NR WP_309714300.1 1872638 g26474 i0 98.2 0.988023952095808 55 1 98.8 0 1 165 883 937 WP_309714300.1 DUF1592 domain-containing protein, partial [Armatimonas sp.] diamond 165 118 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas sp.
29820948 29820948 PRJNA168635_P_NODE_20431_length_181_cov_1.363636_g20015_i0 PRJNA168635 20431 181 1.363636 2.46818116 Armatimonas sp. 1872638 Bacteria Bacteria 111 1.09e-26   NR WP_309707960.1 1872638 g20015 i0 98.3 1.92265193370166 58 1 96.1 0 6 179 1 58 WP_309707960.1 Rne/Rng family ribonuclease [Armatimonas sp.] diamond 348 111 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas sp.
29820959 29820959 PRJNA168635_P_NODE_7351_length_312_cov_3.756654_g6939_i0 PRJNA168635 7351 312 3.756654 11.72076048 Armatimonas sp. 1872638 Bacteria Bacteria 140 1.7099999999999996e-40   NR WP_309709617.1 1872638 g6939 i0 72.6 2.63461538461538 95 24 91.3 1 3 287 29 121 WP_309709617.1 competence type IV pilus major pilin ComGC [Armatimonas sp.] diamond 822 140 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas sp.
30421831 30421831 PRJNA168635_P_NODE_25313_length_169_cov_0.866667_g24897_i0 PRJNA168635 25313 169 0.866667 1.46466723 Armatimonadia bacterium 2663015 Bacteria Bacteria 46.2 8.32e-4   NR MEN6345652.1 2663015 g24897 i0 45.8 0.85207100591716 48 25 85.2 1 169 26 508 554 MEN6345652.1 DNA polymerase [Armatimonadia bacterium] diamond 144 46.2 1 Bacteria   Bacillati Armatimonadota Armatimonadia       Armatimonadia bacterium
30516217 30516217 PRJNA168635_P_NODE_25633_length_169_cov_0.866667_g25217_i0 PRJNA168635 25633 169 0.866667 1.46466723 Armatimonadota bacterium 2033014 Bacteria Bacteria 41.2 0.0495   NR NCQ28066.1 2033014 g25217 i0 44.9 0.869822485207101 49 26 85.2 1 148 5 113 161 NCQ28066.1 hypothetical protein [Armatimonadota bacterium] diamond 147 41.2 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30642470 30642470 PRJNA168635_P_NODE_16473_length_197_cov_2.479730_g16057_i0 PRJNA168635 16473 197 2.47973 4.8850681 Armatimonas sp. 1872638 Bacteria Bacteria 57 1.79e-7   NR WP_394794827.1 1872638 g16057 i0 70.5 0.67005076142132 44 13 67 0 133 2 1 44 WP_394794827.1 prepilin-type N-terminal cleavage/methylation domain-containing protein [Armatimonas sp.] diamond 132 57 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas sp.
30723567 30723567 PRJNA168635_P_NODE_19234_length_185_cov_1.500000_g18818_i0 PRJNA168635 19234 185 1.5 2.775 Fimbriimonas 1005038 Bacteria Bacteria 99.4 5.31e-23   NR MDR3691548.1 1936159 g18818 i0 78.6 19.1675675675676 56 12 90.8 0 2 169 218 273 MDR3691548.1 peptide chain release factor 1 [Fimbriimonas sp.] diamond 3546 99.4 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
30800484 30800484 PRJNA168635_P_NODE_20714_length_180_cov_1.557252_g20298_i0 PRJNA168635 20714 180 1.557252 2.8030536 Armatimonas rosea 685828 Bacteria Bacteria 106 3.69e-27   NR WP_184193394.1 685828 g20298 i0 86.4 0.983333333333333 59 8 98.3 0 4 180 1 59 WP_184193394.1 sigma-70 family RNA polymerase sigma factor [Armatimonas rosea] diamond 177 106 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas rosea
31274573 31274573 PRJNA168635_P_NODE_29035_length_165_cov_0.896552_g28619_i0 PRJNA168635 29035 165 0.896552 1.4793108 Armatimonas sp. 1872638 Bacteria Bacteria 64.3 1.94e-10   NR WP_395143058.1 1872638 g28619 i0 85.3 0.618181818181818 34 5 61.8 0 3 104 166 199 WP_395143058.1 tetratricopeptide repeat protein [Armatimonas sp.] diamond 102 64.3 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas sp.
31274577 31274577 PRJNA168635_P_NODE_34355_length_155_cov_2.566038_g33939_i0 PRJNA168635 34355 155 2.566038 3.9773589 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 55.8 2.63e-7   NR HTQ09305.1 2682144 g33939 i0 44.7 0.909677419354839 47 26 91 0 142 2 29 75 HTQ09305.1 hypothetical protein [Fimbriimonadaceae bacterium] diamond 141 55.8 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
31780533 31780533 PRJNA168635_P_NODE_11337_length_243_cov_4.824742_g10921_i0 PRJNA168635 11337 243 4.824742 11.72412306 Armatimonadota bacterium 2033014 Bacteria Bacteria 80.9 6.48e-18   NR MFM7322945.1 2033014 g10921 i0 77.2 0.703703703703704 57 11 67.9 1 77 241 1 57 MFM7322945.1 LuxR C-terminal-related transcriptional regulator [Armatimonadota bacterium] diamond 171 80.9 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31970442 31970442 PRJNA168635_P_NODE_21138_length_179_cov_1.169231_g20722_i0 PRJNA168635 21138 179 1.169231 2.09292349 Armatimonas sp. 1872638 Bacteria Bacteria 107 3.41e-25   NR WP_394794826.1 1872638 g20722 i0 82.8 1.94413407821229 58 10 97.2 0 3 176 565 622 WP_394794826.1 hypothetical protein [Armatimonas sp.] diamond 348 107 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas sp.
32128896 32128896 PRJNA168635_P_NODE_11198_length_245_cov_2.112245_g10783_i0 PRJNA168635 11198 245 2.112245 5.17500025 Armatimonas sp. 1872638 Bacteria Bacteria 141 7.81e-39   NR WP_394794827.1 1872638 g10783 i0 81.3 0.979591836734694 80 15 98 0 6 245 165 244 WP_394794827.1 prepilin-type N-terminal cleavage/methylation domain-containing protein [Armatimonas sp.] diamond 240 141 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas sp.
32160512 32160512 PRJNA168635_P_NODE_17378_length_192_cov_1.447552_g16962_i0 PRJNA168635 17378 192 1.447552 2.77929984 Armatimonas sp. 1872638 Bacteria Bacteria 115 3.07e-30   NR WP_309707197.1 1872638 g16962 i0 76.2 0.984375 63 15 98.4 0 4 192 58 120 WP_309707197.1 DUF1559 domain-containing protein [Armatimonas sp.] diamond 189 115 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas sp.
32255646 32255646 PRJNA168635_P_NODE_21418_length_178_cov_1.534884_g21002_i0 PRJNA168635 21418 178 1.534884 2.73209352 Armatimonas sp. 1872638 Bacteria Bacteria 49.7 3.28e-5   NR WP_395092140.1 1872638 g21002 i0 55.4 0.943820224719101 56 22 89.3 1 2 160 136 191 WP_395092140.1 PEP-CTERM sorting domain-containing protein [Armatimonas sp.] diamond 168 49.7 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas sp.
32413563 32413563 PRJNA168635_P_NODE_22119_length_176_cov_1.622047_g21703_i0 PRJNA168635 22119 176 1.622047 2.85480272 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 84 4.53e-17   NR MFN8221253.1 2682145 g21703 i0 60.7 0.954545454545455 56 22 95.5 0 5 172 882 937 MFN8221253.1 hypothetical protein [Fimbriimonadales bacterium] diamond 168 84 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
32634356 32634356 PRJNA168635_P_NODE_32260_length_162_cov_0.920354_g31844_i0 PRJNA168635 32260 162 0.920354 1.49097348 Armatimonas sp. 1872638 Bacteria Bacteria 91.3 9.73e-20   NR WP_395088485.1 1872638 g31844 i0 84.9 0.981481481481482 53 8 98.1 0 160 2 667 719 WP_395088485.1 phosphoenolpyruvate carboxylase [Armatimonas sp.] diamond 159 91.3 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;