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contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJNA168635" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA168635 · 8 ✖

analysis 1

  • diamond · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4191367 4191367 PRJNA168635_P_NODE_10984_length_248_cov_2.608040_g10569_i0 PRJNA168635 10984 248 2.60804 6.4679392 root 1 Root_unresolved Root_unresolved 142 1.0299999999999999e-40   NR SBS89264.1 864141 g10569 i0 80.5 16.8508064516129 82 16 99.2 0 247 2 49 130 SBS89264.1 40S ribosomal protein S11, putative (RPS11) [Plasmodium ovale curtisi] diamond 4179 142 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium ovale
28070811 28070811 PRJNA168635_P_NODE_16785_length_195_cov_2.465753_g16369_i0 PRJNA168635 16785 195 2.465753 4.80821835 Eucoccidiorida 75739 SAR_Eukaryotes SAR_Eukaryotes 81.3 2.12e-16   NR XP_002369872.1 508771 g16369 i0 54.7 4.95384615384615 64 29 98.5 0 2 193 144 207 XP_002369872.1 ribosomal protein RPL5 [Toxoplasma gondii ME49] diamond 966 81.3 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
30218034 30218034 PRJNA168635_P_NODE_29132_length_165_cov_0.896552_g28716_i0 PRJNA168635 29132 165 0.896552 1.4793108 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 42.4 0.00396   NR XP_013249861.1 5801 g28716 i0 45.5 3.21818181818182 44 24 80 0 138 7 40 83 XP_013249861.1 hypothetical protein, conserved [Eimeria acervulina] diamond 531 42.7 0.992974238875878 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
30958685 30958685 PRJNA168635_P_NODE_27514_length_167_cov_0.881356_g27098_i0 PRJNA168635 27514 167 0.881356 1.47186452 Gregarina niphandrodes 110365 SAR_Eukaryotes SAR_Eukaryotes 55.1 5.89e-7   NR XP_011129148.1 110365 g27098 i0 54.5 2.4251497005988 44 20 79 0 2 133 60 103 XP_011129148.1 putative dynamin-like protein [Gregarina niphandrodes] diamond 405 55.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina niphandrodes
31260817 31260817 PRJNA168635_P_NODE_18895_length_186_cov_1.715328_g18479_i0 PRJNA168635 18895 186 1.715328 3.19051008 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 88.2 6.09e-20   NR BAN66151.1 5865 g18479 i0 72.1 11.8548387096774 61 17 98.4 0 3 185 1 61 BAN66151.1 40S ribosomal protein S8 [Babesia bovis] diamond 2205 88.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bovis
31514106 31514106 PRJNA168635_P_NODE_18336_length_188_cov_2.043165_g17920_i0 PRJNA168635 18336 188 2.043165 3.8411502 root 1 Root_unresolved Root_unresolved 94 1.16e-22   NR GFE53273.1 5869 g17920 i0 78.9 6.36702127659574 57 12 91 0 171 1 1 57 GFE53273.1 60S ribosomal protein L27a-3-like [Babesia ovis] diamond 1197 94 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovis
31735092 31735092 PRJNA168635_P_NODE_22077_length_176_cov_1.929134_g21661_i0 PRJNA168635 22077 176 1.929134 3.39527584 Apicomplexa 5794 SAR_Eukaryotes SAR_Eukaryotes 75.9 4.41e-16   NR CAL7859112.1 1344799 g21661 i0 69 4.92613636363636 58 18 98.9 0 175 2 34 91 CAL7859112.1 unnamed protein product [Sarcocystis calchasi] diamond 867 75.9 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Sarcocystis Sarcocystis calchasi
32065354 32065354 PRJNA168635_P_NODE_24238_length_171_cov_1.606557_g23822_i0 PRJNA168635 24238 171 1.606557 2.74721247 Theileria orientalis 68886 SAR_Eukaryotes SAR_Eukaryotes 57.4 4.9e-8   NR UVC54537.1 68886 g23822 i0 57.1 2.54385964912281 49 21 86 0 3 149 167 215 UVC54537.1 60S ribosomal L1/L10a protein [Theileria orientalis] diamond 435 57.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria orientalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;