RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "diamond", bioproject = "PRJNA168635" and tax_kingdom = "Shotokuvirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Shotokuvirae · 5 ✖

bioproject 1

  • PRJNA168635 · 5 ✖

analysis 1

  • diamond · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26662097 26662097 PRJNA168635_P_NODE_34021_length_156_cov_2.607477_g33605_i0 PRJNA168635 34021 156 2.607477 4.06766412 Mute swan feces associated circular virus 14 2832264 Viruses Viruses 50.1 2.79e-5   NR QUS52617.1 2832264 g33605 i0 41.2 0.980769230769231 51 30 98.1 0 155 3 118 168 QUS52617.1 replication protein [Mute swan feces associated circular virus 14] diamond 153 50.1 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Gredzevirales Ouroboviridae Aretevirus Aretevirus swances
28021626 28021626 PRJNA168635_P_NODE_24025_length_171_cov_3.057377_g23609_i0 PRJNA168635 24025 171 3.057377 5.22811467 Fish-associated parvo-like hybrid virus 3003968 Viruses Viruses 42.4 0.0189   NR QTZ83196.1 3003968 g23609 i0 90 0.350877192982456 20 2 35.1 0 3 62 310 329 QTZ83196.1 MAG: capsid protein [Grus japonensis parvo-like hybrid virus] diamond 60 42.4 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Lineavirales Oomyviridae Nicoomyvirus Fish-associated parvo-like hybrid virus
28558367 28558367 PRJNA168635_P_NODE_21627_length_177_cov_2.398438_g21211_i0 PRJNA168635 21627 177 2.398438 4.24523526 Luscinia sibilans parvo-like hybrid virus 2794515 Viruses Viruses 95.1 4.88e-21   NR QTE03983.1 2794515 g21211 i0 75.9 0.983050847457627 58 14 98.3 0 177 4 248 305 QTE03983.1 MAG: capsid protein, partial [Luscinia sibilans parvo-like hybrid virus] diamond 174 95.1 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Luscinia sibilans parvo-like hybrid virus
30705694 30705694 PRJNA168635_P_NODE_10654_length_252_cov_13.955665_g10239_i0 PRJNA168635 10654 252 13.955665 35.1682758 Cressdnaviricota sp. 2748378 Viruses Viruses 129 2.82e-34   NR WAE43063.1 2748378 g10239 i0 69.1 0.964285714285714 81 25 96.4 0 2 244 20 100 WAE43063.1 MAG: replication associated protein [Cressdnaviricota sp.] diamond 243 129 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.
31432715 31432715 PRJNA168635_P_NODE_31416_length_162_cov_4.079646_g31000_i0 PRJNA168635 31416 162 4.079646 6.60902652 Cressdnaviricota sp. 2748378 Viruses Viruses 63.5 4.2e-10   NR QKN88869.1 2748378 g31000 i0 54.7 2.90740740740741 53 24 98.1 0 161 3 200 252 QKN88869.1 MAG: replication-associated protein [Cressdnaviricota sp.] diamond 471 63.5 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;