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contig_metadata

19 rows where analysis = "diamond", bioproject = "PRJNA1264536" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 19 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1264536 · 19 ✖

analysis 1

  • diamond · 19 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22040561 22040561 PRJNA1264536_P_NODE_3598_length_290_cov_1.078341_g3524_i0 PRJNA1264536 3598 290 1.078341 3.1271889 Rhabditida 6236 Nematoda Nematoda 172 6.239999999999999e-52   NR KHN73182.1 6265 g3524 i0 88 9.54827586206897 92 11 95.2 0 290 15 152 243 KHN73182.1 Peptidyl-prolyl cis-trans isomerase 3 [Toxocara canis] diamond 2769 172 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
26693984 26693984 PRJNA1264536_P_NODE_4921_length_248_cov_0.891429_g4847_i0 PRJNA1264536 4921 248 0.891429 2.21074392 Trichuris suis 68888 Nematoda Nematoda 43.1 0.0293   NR KHJ47599.1 68888 g4847 i0 42.3 1.25806451612903 52 27 60.5 2 1 150 284 334 KHJ47599.1 hypothetical protein D918_01754 [Trichuris suis] diamond 312 43.1 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichuridae Trichuris Trichuris suis
26693985 26693985 PRJNA1264536_P_NODE_5121_length_246_cov_0.901734_g5047_i0 PRJNA1264536 5121 246 0.901734 2.21826564 Soboliphyme baturini 241478 Nematoda Nematoda 64.7 1.14e-10   NR VDP53605.1 241478 g5047 i0 40.5 0.902439024390244 74 41 90.2 2 2 223 70 140 VDP53605.1 unnamed protein product [Soboliphyme baturini] diamond 222 64.7 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Dioctophymatida Soboliphymatidae Soboliphyme Soboliphyme baturini
26965112 26965112 PRJNA1264536_P_NODE_862_length_628_cov_1.372973_g791_i0 PRJNA1264536 862 628 1.372973 8.62227044 Trichinella 6333 Nematoda Nematoda 411 1.98e-140   NR KAL1230678.1 6334 g791 i0 90.9 2.99522292993631 209 19 99.8 0 627 1 201 409 KAL1230678.1 Elongation factor 1-alpha [Trichinella spiralis] diamond 1881 412 0.997572815533981 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
27042312 27042312 PRJNA1264536_P_NODE_5162_length_245_cov_0.906977_g5088_i0 PRJNA1264536 5162 245 0.906977 2.22209365 Trichuris trichiura 36087 Nematoda Nematoda 69.7 1.44e-13   NR CDW59648.1 36087 g5088 i0 58.2 0.820408163265306 67 27 80.8 1 199 2 2 68 CDW59648.1 Phospho p8 domain containing protein [Trichuris trichiura] diamond 201 69.7 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichuridae Trichuris Trichuris trichiura
27453327 27453327 PRJNA1264536_P_NODE_3023_length_322_cov_1.253012_g2949_i0 PRJNA1264536 3023 322 1.253012 4.03469864 Trichuris suis 68888 Nematoda Nematoda 120 4.12e-32   NR KHJ46846.1 68888 g2949 i0 82.4 0.633540372670807 68 12 63.4 0 322 119 96 163 KHJ46846.1 Ribosomal protein S27a [Trichuris suis] diamond 204 120 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichuridae Trichuris Trichuris suis
27611116 27611116 PRJNA1264536_P_NODE_4804_length_249_cov_0.886364_g4730_i0 PRJNA1264536 4804 249 0.886364 2.20704636 Soboliphyme baturini 241478 Nematoda Nematoda 131 7.31e-38   NR VDO99451.1 241478 g4730 i0 74.7 12.6385542168675 79 20 95.2 0 249 13 3 81 VDO99451.1 unnamed protein product [Soboliphyme baturini] diamond 3147 131 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Dioctophymatida Soboliphymatidae Soboliphyme Soboliphyme baturini
27881369 27881369 PRJNA1264536_P_NODE_4205_length_259_cov_1.198925_g4131_i0 PRJNA1264536 4205 259 1.198925 3.10521575 Metazoa 33208 Nematoda Nematoda 119 7.240000000000001e-29   NR CDW58323.1 36087 g4131 i0 67.4 8.88416988416988 86 28 99.6 0 2 259 524 609 CDW58323.1 carnitine O palmitoyltransferase 1, liver [Trichuris trichiura] diamond 2301 119 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichuridae Trichuris Trichuris trichiura
28305612 28305612 PRJNA1264536_P_NODE_5026_length_247_cov_0.896552_g4952_i0 PRJNA1264536 5026 247 0.896552 2.21448344 Soboliphyme baturini 241478 Nematoda Nematoda 84 1.17e-16   NR VDP45226.1 241478 g4952 i0 46.3 0.995951417004049 82 39 97.2 2 6 245 272 350 VDP45226.1 unnamed protein product, partial [Soboliphyme baturini] diamond 246 84 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Dioctophymatida Soboliphymatidae Soboliphyme Soboliphyme baturini
29081294 29081294 PRJNA1264536_P_NODE_3768_length_281_cov_1.009615_g3694_i0 PRJNA1264536 3768 281 1.009615 2.83701815 Rhabditida 6236 Nematoda Nematoda 157 1.2099999999999999e-42   NR KHN74648.1 6265 g3694 i0 81.5 3.9288256227758 92 17 98.2 0 280 5 22 113 KHN74648.1 40S ribosomal protein S3a [Toxocara canis] diamond 1104 158 0.993670886075949 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
29505317 29505317 PRJNA1264536_P_NODE_5110_length_246_cov_0.901734_g5036_i0 PRJNA1264536 5110 246 0.901734 2.21826564 Ancylostoma duodenale 51022 Nematoda Nematoda 85.5 3.09e-17   NR KIH61615.1 51022 g5036 i0 72.1 3.86585365853659 61 16 74.4 1 184 2 91 150 KIH61615.1 pyridine nucleotide-disulfide oxidoreductase [Ancylostoma duodenale] diamond 951 85.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Ancylostoma Ancylostoma duodenale
30218028 30218028 PRJNA1264536_P_NODE_4712_length_250_cov_0.881356_g4638_i0 PRJNA1264536 4712 250 0.881356 2.20339 Trichinellida 6329 Nematoda Nematoda 85.9 2.58e-17   NR KAL1245047.1 6334 g4638 i0 52 9.096 75 35 90 1 245 21 468 541 KAL1245047.1 Chondroitin proteoglycan [Trichinella spiralis] diamond 2274 86.3 0.995365005793743 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
30818428 30818428 PRJNA1264536_P_NODE_2574_length_351_cov_0.755396_g2500_i0 PRJNA1264536 2574 351 0.755396 2.65143996 Metazoa 33208 Nematoda Nematoda 205 3.06e-63   NR KAL1245728.1 6334 g2500 i0 92.2 22.6923076923077 116 9 99.1 0 350 3 99 214 KAL1245728.1 14-3-3-like protein [Trichinella spiralis] diamond 7965 207 0.990338164251208 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
31292330 31292330 PRJNA1264536_P_NODE_3375_length_302_cov_1.288210_g3301_i0 PRJNA1264536 3375 302 1.28821 3.8903942 Rhabditida 6236 Nematoda Nematoda 103 1.53e-23   NR VDN91935.1 6280 g3301 i0 66.7 10.0331125827815 66 22 65.6 0 302 105 76 141 VDN91935.1 unnamed protein product [Brugia pahangi] diamond 3030 103 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Brugia Brugia pahangi
31432698 31432698 PRJNA1264536_P_NODE_3776_length_280_cov_1.507246_g3702_i0 PRJNA1264536 3776 280 1.507246 4.2202888 Pristionchus fissidentatus 1538716 Nematoda Nematoda 117 8.760000000000001e-29   NR GMT35204.1 1538716 g3702 i0 66 3.02142857142857 94 26 99.6 3 1 279 173 261 GMT35204.1 hypothetical protein PFISCL1PPCAC_26501, partial [Pristionchus fissidentatus] diamond 846 117 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus fissidentatus
31608730 31608730 PRJNA1264536_P_NODE_5476_length_242_cov_0.923077_g5402_i0 PRJNA1264536 5476 242 0.923077 2.23384634 Metazoa 33208 Nematoda Nematoda 60.1 4.71e-9   NR VDM99998.1 103827 g5402 i0 52.8 3.03719008264463 53 24 64.5 1 87 242 69 121 VDM99998.1 unnamed protein product [Thelazia callipaeda] diamond 735 60.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Thelaziidae Thelazia Thelazia callipaeda
31861624 31861624 PRJNA1264536_P_NODE_5117_length_246_cov_0.901734_g5043_i0 PRJNA1264536 5117 246 0.901734 2.21826564 Trichuris 36086 Nematoda Nematoda 140 3.18e-37   NR CDW52192.1 36087 g5043 i0 84 1.97560975609756 81 13 98.8 0 245 3 332 412 CDW52192.1 T complex protein 1 subunit delta [Trichuris trichiura] diamond 486 140 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichuridae Trichuris Trichuris trichiura
31938699 31938699 PRJNA1264536_P_NODE_4937_length_248_cov_0.885714_g4863_i0 PRJNA1264536 4937 248 0.885714 2.19657072 Soboliphyme baturini 241478 Nematoda Nematoda 42.7 0.0399   NR VDP03644.1 241478 g4863 i0 38.5 0.629032258064516 52 32 62.9 0 92 247 86 137 VDP03644.1 unnamed protein product [Soboliphyme baturini] diamond 156 42.7 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Dioctophymatida Soboliphymatidae Soboliphyme Soboliphyme baturini
32192068 32192068 PRJNA1264536_P_NODE_3378_length_302_cov_1.021834_g3304_i0 PRJNA1264536 3378 302 1.021834 3.08593868 Soboliphyme baturini 241478 Nematoda Nematoda 144 8.38e-42   NR VDO92860.1 241478 g3304 i0 81.5 0.804635761589404 81 15 80.5 0 302 60 61 141 VDO92860.1 unnamed protein product [Soboliphyme baturini] diamond 243 144 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Dioctophymatida Soboliphymatidae Soboliphyme Soboliphyme baturini

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;