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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA1264536" and tax_phylum = "Bacteroidota"

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tax_superkingdom 1

tax_phylum 1

  • Bacteroidota · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1264536 · 9 ✖

analysis 1

  • diamond · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1638782 1638782 PRJNA1264536_P_NODE_5442_length_243_cov_0.888235_g5368_i0 PRJNA1264536 5442 243 0.888235 2.15841105 Odoribacter sp. 1965233 Bacteria Bacteria 154 5.079999999999999e-43   NR MDE7074187.1 1965233 g5368 i0 90 3.95061728395062 80 8 98.8 0 241 2 86 165 MDE7074187.1 IMP dehydrogenase [Odoribacter sp.] diamond 960 154 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Odoribacteraceae Odoribacter Odoribacter sp.
18215650 18215650 PRJNA1264536_P_NODE_4595_length_251_cov_0.876404_g4521_i0 PRJNA1264536 4595 251 0.876404 2.19977404 Hanamia sp. 2930256 Bacteria Bacteria 166 2.81e-46   NR HXS57568.1 2930256 g4521 i0 90.4 3.9681274900398402 83 8 99.2 0 250 2 383 465 HXS57568.1 alpha/beta hydrolase-fold protein [Hanamia sp.] diamond 996 166 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Hanamia Hanamia sp.
27831957 27831957 PRJNA1264536_P_NODE_5424_length_243_cov_0.917647_g5350_i0 PRJNA1264536 5424 243 0.917647 2.22988221 Bacteroides sp. 29523 Bacteria Bacteria 143 2.93e-38   NR MBP3669283.1 29523 g5350 i0 92.5 0.987654320987654 80 6 98.8 0 242 3 399 478 MBP3669283.1 ComEC/Rec2 family competence protein [Bacteroides sp.] diamond 240 143 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides sp.
27989978 27989978 PRJNA1264536_P_NODE_5305_length_244_cov_0.912281_g5231_i0 PRJNA1264536 5305 244 0.912281 2.22596564 Bacteroidales bacterium 2030927 Bacteria Bacteria 80.9 5.15e-16   NR MFO7844437.1 2030927 g5231 i0 48.1 0.995901639344262 81 42 99.6 0 2 244 199 279 MFO7844437.1 hypothetical protein [Bacteroidales bacterium] diamond 243 80.9 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales     Bacteroidales bacterium
29126804 29126804 PRJNA1264536_P_NODE_5489_length_242_cov_0.923077_g5415_i0 PRJNA1264536 5489 242 0.923077 2.23384634 Salinivirgaceae bacterium 2053305 Bacteria Bacteria 50.4 4.87e-6   NR MFO7863651.1 2053305 g5415 i0 53.3 0.557851239669422 45 21 55.8 0 51 185 29 73 MFO7863651.1 hypothetical protein [Salinivirgaceae bacterium] diamond 135 50.4 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Salinivirgaceae   Salinivirgaceae bacterium
30471043 30471043 PRJNA1264536_P_NODE_5273_length_244_cov_0.912281_g5199_i0 PRJNA1264536 5273 244 0.912281 2.22596564 FCB group 1783270 Bacteria Bacteria 42.7 0.00533   NR WP_289539213.1 376804 g5199 i0 44.7 1.81967213114754 38 21 46.7 0 239 126 15 52 WP_289539213.1 hypothetical protein [Phocaeicola barnesiae] diamond 444 42.7 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola barnesiae
30579187 30579187 PRJNA1264536_P_NODE_5133_length_246_cov_0.809249_g5059_i0 PRJNA1264536 5133 246 0.809249 1.99075254 Salinivirgaceae bacterium 2053305 Bacteria Bacteria 50.8 3.69e-6   NR MFO7863651.1 2053305 g5059 i0 57.8 0.548780487804878 45 19 54.9 0 55 189 29 73 MFO7863651.1 hypothetical protein [Salinivirgaceae bacterium] diamond 135 50.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Salinivirgaceae   Salinivirgaceae bacterium
31875409 31875409 PRJNA1264536_P_NODE_3637_length_288_cov_1.381395_g3563_i0 PRJNA1264536 3637 288 1.381395 3.9784176 Bacteroidota bacterium 1898104 Bacteria Bacteria 68.9 1.24e-12   NR REK64910.1 1898104 g3563 i0 63.8 0.489583333333333 47 17 49 0 286 146 67 113 REK64910.1 MAG: hypothetical protein DWQ49_01035, partial [Bacteroidota bacterium] diamond 141 68.9 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
32854914 32854914 PRJNA1264536_P_NODE_4680_length_250_cov_0.881356_g4606_i0 PRJNA1264536 4680 250 0.881356 2.20339 Salinivirgaceae bacterium 2053305 Bacteria Bacteria 41.2 0.0218   NR MFO7863651.1 2053305 g4606 i0 81.8 0.264 22 4 26.4 0 3 68 52 73 MFO7863651.1 hypothetical protein [Salinivirgaceae bacterium] diamond 66 41.2 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Salinivirgaceae   Salinivirgaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;