RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA1264536" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1264536 · 6 ✖

analysis 1

  • diamond · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23316084 23316084 PRJNA1264536_P_NODE_4879_length_248_cov_0.891429_g4805_i0 PRJNA1264536 4879 248 0.891429 2.21074392 Monosporozyma unispora 27294 Fungi Fungi 179 1.87e-53   NR KAG0658246.1 27294 g4805 i0 100 0.991935483870968 82 0 99.2 0 246 1 102 183 KAG0658246.1 SUN protein uth1 [Monosporozyma unispora] diamond 246 179 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Monosporozyma Monosporozyma unispora
26820905 26820905 PRJNA1264536_P_NODE_2401_length_364_cov_1.072165_g2327_i0 PRJNA1264536 2401 364 1.072165 3.9026806 Candida viswanathii 5486 Fungi Fungi 107 3.49e-24   NR RCK59601.1 5486 g2327 i0 54.2 4.07967032967033 96 43 78.3 1 80 364 62 157 RCK59601.1 ATP-dependent RNA helicase DBP2 [Candida viswanathii] diamond 1485 107 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Candida Candida viswanathii
27073863 27073863 PRJNA1264536_P_NODE_3862_length_276_cov_1.492611_g3788_i0 PRJNA1264536 3862 276 1.492611 4.11960636 Protomyces lactucae-debilis 2754530 Fungi Fungi 79.3 4.69e-15   NR XP_040722964.1 2754530 g3788 i0 51.4 4.1304347826087 72 35 78.3 0 1 216 234 305 XP_040722964.1 cytoplasmic tRNA 2-thiolation protein 1 [Protomyces lactucae-debilis] diamond 1140 79.3 1 Eukaryota Opisthokonta Fungi Ascomycota Taphrinomycetes Taphrinales Protomycetaceae Protomyces Protomyces lactucae-debilis
29095097 29095097 PRJNA1264536_P_NODE_5528_length_242_cov_0.923077_g5454_i0 PRJNA1264536 5528 242 0.923077 2.23384634 Hyaloscypha bicolor E 1095630 Fungi Fungi 74.3 2.79e-13   NR XP_024729651.1 1095630 g5454 i0 56.2 0.90495867768595 73 15 90.5 1 22 240 377 432 XP_024729651.1 uncharacterized protein K444DRAFT_619455 [Hyaloscypha bicolor E] diamond 219 74.3 1 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes Helotiales Hyaloscyphaceae Hyaloscypha Hyaloscypha bicolor
31685621 31685621 PRJNA1264536_P_NODE_4517_length_251_cov_1.724719_g4443_i0 PRJNA1264536 4517 251 1.724719 4.32904469 Ambrosiozyma monospora 43982 Fungi Fungi 54.3 1.54e-7   NR GMG40450.1 43982 g4443 i0 54 0.597609561752988 50 22 58.6 1 251 105 13 62 GMG40450.1 unnamed protein product [Ambrosiozyma monospora] diamond 150 54.3 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Pichiales Pichiaceae Ambrosiozyma Ambrosiozyma monospora
31893361 31893361 PRJNA1264536_P_NODE_3937_length_273_cov_0.955000_g3863_i0 PRJNA1264536 3937 273 0.955 2.60715 Fungi 4751 Fungi Fungi 44.3 0.00858   NR XP_008599172.1 655819 g3863 i0 41 3.65934065934066 39 23 42.9 0 241 125 132 170 XP_008599172.1 LysM domain-containing protein [Beauveria bassiana ARSEF 2860] diamond 999 44.3 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Cordycipitaceae Beauveria Beauveria bassiana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;