RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA1264536" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 4 ✖

bioproject 1

  • PRJNA1264536 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28463654 28463654 PRJNA1264536_P_NODE_726_length_683_cov_1.106557_g657_i0 PRJNA1264536 726 683 1.106557 7.55778431 brine shrimp arlivirus 5 2900380 Viruses Viruses 154 4.53e-40   NR UNI74091.1 2900380 g657 i0 43.8 0.98389458272328 224 126 98.4 0 682 11 61 284 UNI74091.1 MAG: hypothetical protein [brine shrimp arlivirus 5] diamond 672 154 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Artemvirus Artemvirus bsafivalis
28842241 28842241 PRJNA1264536_P_NODE_3888_length_275_cov_1.158416_g3814_i0 PRJNA1264536 3888 275 1.158416 3.185644 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 112 2.48e-26   NR AVM87439.1 3063761 g3814 i0 60.2 1.01454545454545 93 34 98.2 1 275 6 467 559 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 279 112 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2
31591071 31591071 PRJNA1264536_P_NODE_1076_length_561_cov_1.526639_g1003_i0 PRJNA1264536 1076 561 1.526639 8.56444479 brine shrimp arlivirus 5 2900380 Viruses Viruses 303 2.1599999999999997e-99   NR UNI74090.1 2900380 g1003 i0 79.6 0.994652406417112 186 38 99.5 0 3 560 209 394 UNI74090.1 MAG: hypothetical protein [brine shrimp arlivirus 5] diamond 558 303 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Artemvirus Artemvirus bsafivalis
32318850 32318850 PRJNA1264536_P_NODE_2699_length_341_cov_0.858209_g2625_i0 PRJNA1264536 2699 341 0.858209 2.92649269 Qianjiang picorna-like virus 6 3348787 Viruses Viruses 127 2.4499999999999997e-31   NR XHA88449.1 3348787 g2625 i0 54.9 0.994134897360704 113 51 99.4 0 339 1 1946 2058 XHA88449.1 MAG: polyprotein [Qianjiang picorna-like virus 6] diamond 339 127 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Qianjiang picorna-like virus 6

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;