contig_metadata
10 rows where analysis = "diamond", bioproject = "PRJNA1263632" and tax_phylum = "Euglenozoa"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27989974 | 27989974 | PRJNA1263632_P_NODE_4685_length_290_cov_1.345622_g4667_i0 | PRJNA1263632 | 4685 | 290 | 1.345622 | 3.9023038 | Phytomonas sp. EM1 | 479712 | Euglenozoa | other_Eukaryota | 142 | 8.879999999999998e-37 | NR | CCW61537.1 | 479712 | g4667 | i0 | 68.5 | 3.83793103448276 | 92 | 29 | 95.2 | 0 | 279 | 4 | 280 | 371 | CCW61537.1 unnamed protein product [Phytomonas sp. EM1] | diamond | 1113 | 142 | 1 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Trypanosomatida | Trypanosomatidae | Phytomonas | Phytomonas sp. EM1 | ||
| 28400342 | 28400342 | PRJNA1263632_P_NODE_3946_length_313_cov_0.841667_g3928_i0 | PRJNA1263632 | 3946 | 313 | 0.841667 | 2.63441771 | Bodo saltans | 75058 | Euglenozoa | other_Eukaryota | 172 | 6.47e-53 | NR | CUE73723.1 | 75058 | g3928 | i0 | 87.9 | 0.87220447284345 | 91 | 11 | 87.2 | 0 | 1 | 273 | 57 | 147 | CUE73723.1 ubiquitin ribosomal protein S27a, putative [Bodo saltans] | diamond | 273 | 172 | 1 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Eubodonida | Bodonidae | Bodo | Bodo saltans | ||
| 28431966 | 28431966 | PRJNA1263632_P_NODE_6846_length_249_cov_0.875000_g6828_i0 | PRJNA1263632 | 6846 | 249 | 0.875 | 2.17875 | Bodo saltans | 75058 | Euglenozoa | other_Eukaryota | 79.7 | 8.81e-17 | NR | CUF83951.1 | 75058 | g6828 | i0 | 55.7 | 0.734939759036145 | 61 | 27 | 73.5 | 0 | 247 | 65 | 81 | 141 | CUF83951.1 membrane-associated protein, putative [Bodo saltans] | diamond | 183 | 79.7 | 1 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Eubodonida | Bodonidae | Bodo | Bodo saltans | ||
| 28842238 | 28842238 | PRJNA1263632_P_NODE_7468_length_246_cov_0.890173_g7450_i0 | PRJNA1263632 | 7468 | 246 | 0.890173 | 2.18982558 | Trypanosoma vivax | 5699 | Euglenozoa | other_Eukaryota | 96.3 | 2.83e-21 | NR | KAG8348314.1 | 5699 | g7450 | i0 | 61.4 | 3.98780487804878 | 83 | 31 | 100 | 1 | 246 | 1 | 247 | 329 | KAG8348314.1 putative protein phosphatase 2C [Trypanosoma vivax] | diamond | 981 | 96.3 | 1 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Trypanosomatida | Trypanosomatidae | Trypanosoma | Trypanosoma vivax | ||
| 29126799 | 29126799 | PRJNA1263632_P_NODE_7649_length_245_cov_0.895349_g7631_i0 | PRJNA1263632 | 7649 | 245 | 0.895349 | 2.19360505 | Trypanosoma theileri | 67003 | Euglenozoa | other_Eukaryota | 107 | 7.56e-26 | NR | XP_028887220.1 | 67003 | g7631 | i0 | 63.5 | 6.29387755102041 | 74 | 27 | 90.6 | 0 | 244 | 23 | 238 | 311 | XP_028887220.1 cell division related protein kinase 2 [Trypanosoma theileri] | diamond | 1542 | 107 | 1 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Trypanosomatida | Trypanosomatidae | Trypanosoma | Trypanosoma theileri | ||
| 30358736 | 30358736 | PRJNA1263632_P_NODE_6612_length_250_cov_0.870056_g6594_i0 | PRJNA1263632 | 6612 | 250 | 0.870056 | 2.17514 | Bodo saltans | 75058 | Euglenozoa | other_Eukaryota | 70.5 | 6.65e-12 | NR | CUG91655.1 | 75058 | g6594 | i0 | 50.8 | 0.78 | 65 | 28 | 73.2 | 1 | 63 | 245 | 154 | 218 | CUG91655.1 Hypothetical protein, putative [Bodo saltans] | diamond | 195 | 70.5 | 1 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Eubodonida | Bodonidae | Bodo | Bodo saltans | ||
| 31210841 | 31210841 | PRJNA1263632_P_NODE_5095_length_280_cov_1.014493_g5077_i0 | PRJNA1263632 | 5095 | 280 | 1.014493 | 2.8405804 | Bodo saltans | 75058 | Euglenozoa | other_Eukaryota | 95.5 | 6.050000000000001e-21 | NR | CUG54525.1 | 75058 | g5077 | i0 | 50.5 | 1.89642857142857 | 93 | 45 | 99.6 | 1 | 280 | 2 | 174 | 265 | CUG54525.1 arginase-like protein, putative [Bodo saltans] | diamond | 531 | 95.5 | 1 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Eubodonida | Bodonidae | Bodo | Bodo saltans | ||
| 32223691 | 32223691 | PRJNA1263632_P_NODE_8018_length_243_cov_0.905882_g8000_i0 | PRJNA1263632 | 8018 | 243 | 0.905882 | 2.20129326 | Bodo saltans | 75058 | Euglenozoa | other_Eukaryota | 63.5 | 1.72e-9 | NR | CUG87619.1 | 75058 | g8000 | i0 | 38.8 | 0.987654320987654 | 80 | 46 | 95.1 | 1 | 232 | 2 | 2 | 81 | CUG87619.1 Hypothetical protein, putative [Bodo saltans] | diamond | 240 | 63.5 | 1 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Eubodonida | Bodonidae | Bodo | Bodo saltans | ||
| 32350376 | 32350376 | PRJNA1263632_P_NODE_8459_length_241_cov_0.916667_g8441_i0 | PRJNA1263632 | 8459 | 241 | 0.916667 | 2.20916747 | Bodo saltans | 75058 | Euglenozoa | other_Eukaryota | 72 | 1.67e-12 | NR | CUG92886.1 | 75058 | g8441 | i0 | 50 | 1.59336099585062 | 80 | 27 | 99.6 | 1 | 241 | 2 | 132 | 198 | CUG92886.1 GTPase activating protein, putative [Bodo saltans] | diamond | 384 | 72 | 1 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Eubodonida | Bodonidae | Bodo | Bodo saltans | ||
| 32715342 | 32715342 | PRJNA1263632_P_NODE_6680_length_250_cov_0.870056_g6662_i0 | PRJNA1263632 | 6680 | 250 | 0.870056 | 2.17514 | Trypanosomatidae | 5654 | Euglenozoa | other_Eukaryota | 124 | 8.369999999999999e-31 | NR | TPP54184.1 | 5661 | g6662 | i0 | 67.5 | 4.98 | 83 | 27 | 99.6 | 0 | 250 | 2 | 795 | 877 | TPP54184.1 RNB domain family protein [Leishmania donovani] | diamond | 1245 | 125 | 0.992 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Trypanosomatida | Trypanosomatidae | Leishmania | Leishmania donovani |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;