RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1263632" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1263632 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29158306 29158306 PRJNA1263632_P_NODE_8549_length_234_cov_14.714286_g8531_i0 PRJNA1263632 8549 234 14.714286 34.43142924 Hebeloma cylindrosporum 76867 Fungi Fungi 42 0.0471   NR KIM44929.1 76867 g8531 i0 32.8 0.782051282051282 61 39 75.6 1 226 50 80 140 KIM44929.1 hypothetical protein M413DRAFT_366735 [Hebeloma cylindrosporum] diamond 183 42 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Hymenogastraceae Hebeloma Hebeloma cylindrosporum
30849973 30849973 PRJNA1263632_P_NODE_8414_length_241_cov_0.916667_g8396_i0 PRJNA1263632 8414 241 0.916667 2.20916747 Agaricomycetes 155619 Fungi Fungi 87 1.77e-19   NR KAH8120433.1 127956 g8396 i0 50.6 5.00414937759336 81 39 99.6 1 241 2 72 152 KAH8120433.1 single hybrid motif-containing protein [Phellopilus nigrolimitatus] diamond 1206 87 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Hymenochaetales Hymenochaetaceae Phellopilus Phellopilus nigrolimitatus
31210842 31210842 PRJNA1263632_P_NODE_5975_length_259_cov_1.655914_g5957_i0 PRJNA1263632 5975 259 1.655914 4.28881726 Flagelloscypha sp. PMI_526 1485228 Fungi Fungi 64.3 8.3e-10   NR KAH8827993.1 1485228 g5957 i0 40.8 0.88030888030888 76 41 88 1 229 2 207 278 KAH8827993.1 autophagy-related protein 27 [Flagelloscypha sp. PMI_526] diamond 228 64.3 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Tricholomataceae Flagelloscypha Flagelloscypha sp. PMI_526

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;