RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1262902" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1262902 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8016962 8016962 PRJNA1262902_P_NODE_8987_length_248_cov_0.880000_g8945_i0 PRJNA1262902 8987 248 0.88 2.1824 Gelatoporia subvermispora B 914234 Fungi Fungi 85.5 2.52e-17   NR EMD39669.1 914234 g8945 i0 81 4.06451612903226 42 8 50.8 0 121 246 194 235 EMD39669.1 hypothetical protein CERSUDRAFT_103661 [Gelatoporia subvermispora B] diamond 1008 85.5 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Gelatoporiaceae Gelatoporia Gelatoporia subvermispora
20765086 20765086 PRJNA1262902_P_NODE_3417_length_307_cov_0.987179_g3375_i0 PRJNA1262902 3417 307 0.987179 3.03063953 Sparassis crispa 139825 Fungi Fungi 58.9 1.79e-8   NR XP_027617701.1 139825 g3375 i0 61.4 0.830618892508143 44 17 43 0 293 162 1 44 XP_027617701.1 hypothetical protein SCP_1000300 [Sparassis crispa] diamond 255 58.9 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Sparassidaceae Sparassis Sparassis crispa
31306147 31306147 PRJNA1262902_P_NODE_1055_length_436_cov_2.269972_g1013_i0 PRJNA1262902 1055 436 2.269972 9.89707792 Sistotremastrum niveocremeum HHB97 2834505 Fungi Fungi 180 6.65e-54   NR KZS94574.1 1314777 g1013 i0 100 0.605504587155963 88 0 60.6 0 106 369 160 247 KZS94574.1 hypothetical protein SISNIDRAFT_478306 [Sistotremastrum niveocremeum HHB9708] diamond 264 180 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Sistotremastrales Sistotremastraceae Sertulicium Sertulicium niveocremeum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;