RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1262902" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1262902 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28652953 28652953 PRJNA1262902_P_NODE_10547_length_244_cov_1.649123_g10505_i0 PRJNA1262902 10547 244 1.649123 4.02386012 Artemia franciscana 6661 Arthropoda Arthropoda 57.8 1.88e-7   NR KAK2726087.1 6661 g10505 i0 36.2 4.22950819672131 69 44 84.8 0 244 38 399 467 KAK2726087.1 hypothetical protein QYM36_000518 [Artemia franciscana] diamond 1032 57.8 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Anostraca Artemiidae Artemia Artemia franciscana
30453283 30453283 PRJNA1262902_P_NODE_113_length_1055_cov_1.863544_g92_i0 PRJNA1262902 113 1055 1.863544 19.6603892 Wyeomyia smithii 174621 Arthropoda Arthropoda 267 1.53e-79   NR XP_055529762.1 174621 g92 i0 42.7 3.10521327014218 365 189 99.5 8 1050 1 274 633 XP_055529762.1 origin recognition complex subunit 3 [Wyeomyia smithii] diamond 3276 267 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Culicidae Wyeomyia Wyeomyia smithii
31907175 31907175 PRJNA1262902_P_NODE_5017_length_278_cov_1.687805_g4975_i0 PRJNA1262902 5017 278 1.687805 4.6920979 Artemia franciscana 6661 Arthropoda Arthropoda 59.7 5.29e-8   NR XP_065563799.1 6661 g4975 i0 59.2 1.04676258992806 49 20 52.9 0 274 128 77 125 XP_065563799.1 zinc finger protein 420-like isoform X1 [Artemia franciscana] diamond 291 59.7 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Anostraca Artemiidae Artemia Artemia franciscana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;