RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA1262902" and tax_kingdom = "Nanobdellati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Nanobdellati · 1 ✖

bioproject 1

  • PRJNA1262902 · 1 ✖

analysis 1

  • diamond · 1 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32540240 32540240 PRJNA1262902_P_NODE_2339_length_339_cov_1.157895_g2297_i0 PRJNA1262902 2339 339 1.157895 3.92526405 Candidatus Altiarchaeales archaeon 2250256 Archaea Archaea 44.3 0.0171   NR RLI93475.1 2250256 g2297 i0 34.8 0.814159292035398 92 47 69.9 4 57 293 82 173 RLI93475.1 MAG: hypothetical protein DRO94_05110, partial [Candidatus Altiarchaeales archaeon] diamond 276 44.3 1 Archaea   Nanobdellati Candidatus Altarchaeota Candidatus Altiarchaeia Candidatus Altarchaeales     Candidatus Altiarchaeales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;