RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1255065" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1255065 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29063427 29063427 PRJNA1255065_P_NODE_109208_length_169_cov_0.866667_g106980_i0 PRJNA1255065 109208 169 0.866667 1.46466723 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 102 2.2999999999999994e-24   NR MEO7617268.1 2026720 g106980 i0 81.8 0.976331360946746 55 10 97.6 0 3 167 155 209 MEO7617268.1 phenylalanine--tRNA ligase subunit alpha [Candidatus Saccharibacteria bacterium] diamond 165 102 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
29662839 29662839 PRJNA1255065_P_NODE_113370_length_168_cov_0.873950_g111142_i0 PRJNA1255065 113370 168 0.87395 1.468236 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 105 4.81e-25   NR MBB1555000.1 2026720 g111142 i0 98.2 1 56 1 100 0 168 1 320 375 MBB1555000.1 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [Candidatus Saccharibacteria bacterium] diamond 168 105 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
29820864 29820864 PRJNA1255065_P_NODE_122251_length_166_cov_1.547009_g120023_i0 PRJNA1255065 122251 166 1.547009 2.56803494 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 95.1 3.0500000000000003e-22   NR HET7629805.1 2973664 g120023 i0 77.4 3.81325301204819 53 12 95.8 0 159 1 164 216 HET7629805.1 hypothetical protein [Candidatus Saccharimonadales bacterium] diamond 633 95.1 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;