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contig_metadata

35 rows where analysis = "diamond", bioproject = "PRJNA1255065" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 35 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1255065 · 35 ✖

analysis 1

  • diamond · 35 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14389216 14389216 PRJNA1255065_P_NODE_137792_length_164_cov_0.904348_g135564_i0 PRJNA1255065 137792 164 0.904348 1.48313072 Acidobacteriota bacterium 1978231 Bacteria Bacteria 89.7 3.36e-19   NR MCA1608248.1 1978231 g135564 i0 81.5 7.90243902439024 54 10 98.8 0 164 3 354 407 MCA1608248.1 DNA gyrase subunit B [Acidobacteriota bacterium] diamond 1296 89.7 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
26598674 26598674 PRJNA1255065_P_NODE_142321_length_163_cov_0.912281_g140093_i0 PRJNA1255065 142321 163 0.912281 1.48701803 Acidobacteriota bacterium 1978231 Bacteria Bacteria 41.6 0.0321   NR MYD88649.1 1978231 g140093 i0 40.8 0.901840490797546 49 29 90.2 0 159 13 72 120 MYD88649.1 1-acyl-sn-glycerol-3-phosphate acyltransferase [Acidobacteriota bacterium] diamond 147 41.6 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27010414 27010414 PRJNA1255065_P_NODE_111462_length_168_cov_0.873950_g109234_i0 PRJNA1255065 111462 168 0.87395 1.468236 Blastocatellia bacterium 2052146 Bacteria Bacteria 86.3 6.1e-18   NR HEX9001648.1 2052146 g109234 i0 79.6 2.89285714285714 54 11 96.4 0 6 167 15 68 HEX9001648.1 hypothetical protein [Blastocatellia bacterium] diamond 486 86.3 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
27042220 27042220 PRJNA1255065_P_NODE_127322_length_166_cov_0.888889_g125094_i0 PRJNA1255065 127322 166 0.888889 1.47555574 Terriglobia bacterium 2081523 Bacteria Bacteria 41.6 0.0348   NR MBZ5498510.1 2081523 g125094 i0 41.7 0.650602409638554 36 21 65.1 0 11 118 809 844 MBZ5498510.1 hypothetical protein [Terriglobia bacterium] diamond 108 41.6 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia       Terriglobia bacterium
27516190 27516190 PRJNA1255065_P_NODE_152683_length_162_cov_0.920354_g150455_i0 PRJNA1255065 152683 162 0.920354 1.49097348 Acidobacteriota bacterium 1978231 Bacteria Bacteria 67.4 3.95e-12   NR MBA2493936.1 1978231 g150455 i0 69.4 4.53703703703704 49 15 90.7 0 149 3 1 49 MBA2493936.1 class IV adenylate cyclase [Acidobacteriota bacterium] diamond 735 67.4 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27547738 27547738 PRJNA1255065_P_NODE_106904_length_169_cov_0.866667_g104676_i0 PRJNA1255065 106904 169 0.866667 1.46466723 Acidobacteriota bacterium 1978231 Bacteria Bacteria 72 3.01e-14   NR MBI3450238.1 1978231 g104676 i0 64.8 0.958579881656805 54 19 95.9 0 167 6 48 101 MBI3450238.1 tetratricopeptide repeat protein [Acidobacteriota bacterium] diamond 162 72 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27579309 27579309 PRJNA1255065_P_NODE_91824_length_184_cov_0.837037_g89596_i0 PRJNA1255065 91824 184 0.837037 1.54014808 Acidobacteriota bacterium 1978231 Bacteria Bacteria 45.8 0.00129   NR PYV52812.1 1978231 g89596 i0 37.3 0.831521739130435 51 32 83.2 0 12 164 42 92 PYV52812.1 MAG: exosortase, partial [Acidobacteriota bacterium] diamond 153 45.8 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27642690 27642690 PRJNA1255065_P_NODE_111424_length_168_cov_0.873950_g109196_i0 PRJNA1255065 111424 168 0.87395 1.468236 Blastocatellia bacterium 2052146 Bacteria Bacteria 84 3.95e-17   NR HMX29060.1 2052146 g109196 i0 89.4 3.41071428571429 47 5 83.9 0 166 26 84 130 HMX29060.1 DPP IV N-terminal domain-containing protein [Blastocatellia bacterium] diamond 573 84 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
27674239 27674239 PRJNA1255065_P_NODE_148964_length_162_cov_0.920354_g146736_i0 PRJNA1255065 148964 162 0.920354 1.49097348 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 98.6 7.3e-23   NR MBA3355079.1 2283092 g146736 i0 79.6 4 54 11 100 0 162 1 163 216 MBA3355079.1 NAD-dependent epimerase/dehydratase family protein [Pyrinomonadaceae bacterium] diamond 648 98.6 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
28021524 28021524 PRJNA1255065_P_NODE_119425_length_167_cov_0.881356_g117197_i0 PRJNA1255065 119425 167 0.881356 1.47186452 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 61.2 3.94e-9   NR MFN0166669.1 2212468 g117197 i0 50.9 0.952095808383233 53 26 95.2 0 166 8 429 481 MFN0166669.1 S8 family serine peptidase [Bryobacteraceae bacterium] diamond 159 61.2 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
28400260 28400260 PRJNA1255065_P_NODE_119906_length_167_cov_0.881356_g117678_i0 PRJNA1255065 119906 167 0.881356 1.47186452 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 59.3 1.88e-8   NR MBD0372377.1 2283092 g117678 i0 49.1 0.952095808383233 53 27 95.2 0 9 167 389 441 MBD0372377.1 group II intron reverse transcriptase/maturase [Pyrinomonadaceae bacterium] diamond 159 59.3 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
28684614 28684614 PRJNA1255065_P_NODE_145967_length_163_cov_0.912281_g143739_i0 PRJNA1255065 145967 163 0.912281 1.48701803 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 97.1 5.079999999999999e-23   NR MFM9903274.1 2283092 g143739 i0 85.2 7.95092024539877 54 8 99.4 0 163 2 55 108 MFM9903274.1 pseudouridine synthase [Pyrinomonadaceae bacterium] diamond 1296 97.1 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
28779000 28779000 PRJNA1255065_P_NODE_106687_length_169_cov_0.866667_g104459_i0 PRJNA1255065 106687 169 0.866667 1.46466723 Terriglobia bacterium 2081523 Bacteria Bacteria 79.3 1.51e-15   NR HYR91129.1 2081523 g104459 i0 63 0.958579881656805 54 20 95.9 0 6 167 56 109 HYR91129.1 DoxX family protein [Terriglobia bacterium] diamond 162 79.3 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia       Terriglobia bacterium
29095016 29095016 PRJNA1255065_P_NODE_125568_length_166_cov_0.888889_g123340_i0 PRJNA1255065 125568 166 0.888889 1.47555574 Acidobacteriota bacterium 1978231 Bacteria Bacteria 45.1 0.0019   NR MBI3449784.1 1978231 g123340 i0 45.7 0.831325301204819 46 25 83.1 0 142 5 117 162 MBI3449784.1 ABC transporter permease subunit [Acidobacteriota bacterium] diamond 138 45.1 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29252505 29252505 PRJNA1255065_P_NODE_111289_length_168_cov_0.873950_g109061_i0 PRJNA1255065 111289 168 0.87395 1.468236 Acidobacteriota bacterium 1978231 Bacteria Bacteria 80.9 4.96e-16   NR PYV44665.1 1978231 g109061 i0 73.2 1 56 15 100 0 1 168 173 228 PYV44665.1 MAG: hypothetical protein DMG06_05490 [Acidobacteriota bacterium] diamond 168 80.9 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29743981 29743981 PRJNA1255065_P_NODE_109270_length_169_cov_0.866667_g107042_i0 PRJNA1255065 109270 169 0.866667 1.46466723 Acidobacteriota 57723 Bacteria Bacteria 82.8 1.01e-16   NR HTM17862.1 1964191 g107042 i0 75.9 2.87573964497041 54 13 95.9 0 6 167 1201 1254 HTM17862.1 MBG domain-containing protein [Terracidiphilus sp.] diamond 486 83.6 0.990430622009569 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Terracidiphilus Terracidiphilus sp.
29820868 29820868 PRJNA1255065_P_NODE_149771_length_162_cov_0.920354_g147543_i0 PRJNA1255065 149771 162 0.920354 1.49097348 Acidobacteria bacterium Mor1 1660251 Bacteria Bacteria 51.2 1.23e-5   NR ANM29950.1 1660251 g147543 i0 44.2 0.962962962962963 52 28 94.4 1 5 157 65 116 ANM29950.1 hypothetical protein ABI59_10765 [Acidobacteria bacterium Mor1] diamond 156 51.2 1 Bacteria Acidobacteriota subdivision 22 Pseudomonadati Acidobacteriota         Acidobacteria bacterium Mor1
29916040 29916040 PRJNA1255065_P_NODE_135611_length_164_cov_0.904348_g133383_i0 PRJNA1255065 135611 164 0.904348 1.48313072 Bryocella elongata 863522 Bacteria Bacteria 41.2 0.0446   NR WP_103931646.1 863522 g133383 i0 45.9 0.676829268292683 37 18 67.7 1 124 14 91 125 WP_103931646.1 tetratricopeptide repeat protein [Bryocella elongata] diamond 111 41.2 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Bryocella Bryocella elongata
30136626 30136626 PRJNA1255065_P_NODE_124552_length_166_cov_0.888889_g122324_i0 PRJNA1255065 124552 166 0.888889 1.47555574 Acidobacteriota bacterium 1978231 Bacteria Bacteria 77.8 3.27e-16   NR MDQ3800021.1 1978231 g122324 i0 66.7 2.96385542168675 54 18 97.6 0 162 1 54 107 MDQ3800021.1 hypothetical protein [Acidobacteriota bacterium] diamond 492 77.8 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30390190 30390190 PRJNA1255065_P_NODE_148753_length_162_cov_0.920354_g146525_i0 PRJNA1255065 148753 162 0.920354 1.49097348 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 55.8 2.88e-7   NR HWN84523.1 2910147 g146525 i0 52.8 0.981481481481482 53 25 98.1 0 3 161 352 404 HWN84523.1 glycosyltransferase family 39 protein [Vicinamibacterales bacterium] diamond 159 55.8 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
30579104 30579104 PRJNA1255065_P_NODE_144433_length_163_cov_0.912281_g142205_i0 PRJNA1255065 144433 163 0.912281 1.48701803 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 102 1.2199999999999999e-23   NR MCY7346543.1 2283092 g142205 i0 90.7 0.993865030674847 54 5 99.4 0 2 163 365 418 MCY7346543.1 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit [Pyrinomonadaceae bacterium] diamond 162 102 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
30642378 30642378 PRJNA1255065_P_NODE_87153_length_190_cov_1.106383_g84925_i0 PRJNA1255065 87153 190 1.106383 2.1021277 Acidobacteriota bacterium 1978231 Bacteria Bacteria 42.4 0.0257   NR MDH3816880.1 1978231 g84925 i0 46.5 0.678947368421053 43 23 67.9 0 35 163 246 288 MDH3816880.1 serine/threonine-protein kinase [Acidobacteriota bacterium] diamond 129 42.4 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30723540 30723540 PRJNA1255065_P_NODE_135674_length_164_cov_0.904348_g133446_i0 PRJNA1255065 135674 164 0.904348 1.48313072 Bacteria 2 Bacteria Bacteria 98.2 1.68e-22   NR MDX2041092.1 1978231 g133446 i0 90.7 3.95121951219512 54 1 98.8 1 3 164 262 311 MDX2041092.1 Gfo/Idh/MocA family oxidoreductase [Acidobacteriota bacterium] diamond 648 98.2 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30737182 30737182 PRJNA1255065_P_NODE_123754_length_166_cov_0.888889_g121526_i0 PRJNA1255065 123754 166 0.888889 1.47555574 Acidobacteriota bacterium 1978231 Bacteria Bacteria 41.6 0.0311   NR MBW3672313.1 1978231 g121526 i0 50 0.831325301204819 46 22 81.3 1 166 32 150 195 MBW3672313.1 serine/threonine protein kinase [Acidobacteriota bacterium] diamond 138 41.6 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31369631 31369631 PRJNA1255065_P_NODE_131496_length_165_cov_0.896552_g129268_i0 PRJNA1255065 131496 165 0.896552 1.4793108 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 101 2.1999999999999996e-24   NR HLM01336.1 2283092 g129268 i0 87.3 1 55 7 100 0 1 165 218 272 HLM01336.1 diaminopimelate epimerase [Pyrinomonadaceae bacterium] diamond 165 101 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
31496110 31496110 PRJNA1255065_P_NODE_116696_length_167_cov_0.881356_g114468_i0 PRJNA1255065 116696 167 0.881356 1.47186452 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 73.9 1.32e-13   NR MEQ1923971.1 2283092 g114468 i0 63.5 2.80239520958084 52 19 93.4 0 157 2 436 487 MEQ1923971.1 carboxypeptidase-like regulatory domain-containing protein [Pyrinomonadaceae bacterium] diamond 468 73.9 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
31527650 31527650 PRJNA1255065_P_NODE_126776_length_166_cov_0.888889_g124548_i0 PRJNA1255065 126776 166 0.888889 1.47555574 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 58.2 4.62e-8   NR HEY0459462.1 2283092 g124548 i0 83.3 0.542168674698795 30 5 54.2 0 92 3 1 30 HEY0459462.1 protein kinase [Pyrinomonadaceae bacterium] diamond 90 58.2 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
31685538 31685538 PRJNA1255065_P_NODE_120017_length_167_cov_0.881356_g117789_i0 PRJNA1255065 120017 167 0.881356 1.47186452 Acidobacteriota bacterium 1978231 Bacteria Bacteria 42 0.0251   NR MEN3339275.1 1978231 g117789 i0 51.2 0.736526946107784 41 17 68.3 1 157 44 164 204 MEN3339275.1 hypothetical protein [Acidobacteriota bacterium] diamond 123 42 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31907090 31907090 PRJNA1255065_P_NODE_93097_length_182_cov_1.345865_g90869_i0 PRJNA1255065 93097 182 1.345865 2.4494743 Blastocatellia bacterium 2052146 Bacteria Bacteria 94.7 5.07e-21   NR HMY76241.1 2052146 g90869 i0 79.3 1.91208791208791 58 12 95.6 0 176 3 5 62 HMY76241.1 serine/threonine-protein kinase [Blastocatellia bacterium] diamond 348 94.7 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
31956558 31956558 PRJNA1255065_P_NODE_142617_length_163_cov_0.912281_g140389_i0 PRJNA1255065 142617 163 0.912281 1.48701803 Bacteria 2 Bacteria Bacteria 106 6.82e-26   NR MBP7779853.1 1978231 g140389 i0 88.9 2.96319018404908 54 6 99.4 0 162 1 301 354 MBP7779853.1 VWA domain-containing protein [Acidobacteriota bacterium] diamond 483 106 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32255546 32255546 PRJNA1255065_P_NODE_111318_length_168_cov_0.873950_g109090_i0 PRJNA1255065 111318 168 0.87395 1.468236 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 89.7 1.39e-19   NR HZT39111.1 2212468 g109090 i0 79.6 0.964285714285714 54 11 96.4 0 162 1 69 122 HZT39111.1 ATP-binding domain-containing protein [Bryobacteraceae bacterium] diamond 162 89.7 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
32318764 32318764 PRJNA1255065_P_NODE_119299_length_167_cov_0.881356_g117071_i0 PRJNA1255065 119299 167 0.881356 1.47186452 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 62 8.92e-10   NR HVF66569.1 2283092 g117071 i0 65.2 1.59880239520958 46 16 82.6 0 162 25 149 194 HVF66569.1 carboxypeptidase-like regulatory domain-containing protein [Pyrinomonadaceae bacterium] diamond 267 62 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
32381782 32381782 PRJNA1255065_P_NODE_120779_length_167_cov_0.881356_g118551_i0 PRJNA1255065 120779 167 0.881356 1.47186452 Vicinamibacteria bacterium 2793154 Bacteria Bacteria 108 6.35e-26   NR HEY7509539.1 2793154 g118551 i0 92.7 0.988023952095808 55 4 98.8 0 167 3 241 295 HEY7509539.1 hypothetical protein [Vicinamibacteria bacterium] diamond 165 108 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria       Vicinamibacteria bacterium
32540173 32540173 PRJNA1255065_P_NODE_69579_length_220_cov_2.128655_g67351_i0 PRJNA1255065 69579 220 2.128655 4.683041 Acidobacteriota bacterium 1978231 Bacteria Bacteria 42.7 0.0278   NR MDP9053538.1 1978231 g67351 i0 42.3 0.709090909090909 52 30 70.9 0 177 22 233 284 MDP9053538.1 pilus assembly protein N-terminal domain-containing protein [Acidobacteriota bacterium] diamond 156 42.7 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32886232 32886232 PRJNA1255065_P_NODE_109160_length_169_cov_0.866667_g106932_i0 PRJNA1255065 109160 169 0.866667 1.46466723 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 88.6 4.29e-19   NR MEO7539744.1 2283092 g106932 i0 76.4 1.95266272189349 55 13 97.6 0 167 3 203 257 MEO7539744.1 VWA domain-containing protein [Pyrinomonadaceae bacterium] diamond 330 88.6 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;