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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA1255065" and tax_kingdom = "Fusobacteriati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Fusobacteriati · 7 ✖

bioproject 1

  • PRJNA1255065 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28937110 28937110 PRJNA1255065_P_NODE_138168_length_164_cov_0.904348_g135940_i0 PRJNA1255065 138168 164 0.904348 1.48313072 Cetobacterium sp. ZWU 2071632 Bacteria Bacteria 105 4.84e-25   NR WP_047381127.1 1340502 g135940 i0 98.1 0.98780487804878 54 1 98.8 0 164 3 272 325 WP_047381127.1 uroporphyrinogen-III C-methyltransferase [Cetobacterium sp. ZWU0022] diamond 162 105 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. ZWU0022
28937120 28937120 PRJNA1255065_P_NODE_99848_length_174_cov_1.624000_g97620_i0 PRJNA1255065 99848 174 1.624 2.82576 Cetobacterium somerae 188913 Bacteria Bacteria 86.3 5.91e-18   NR WP_407535751.1 188913 g97620 i0 73.7 0.982758620689655 57 15 98.3 0 3 173 243 299 WP_407535751.1 hypothetical protein [Cetobacterium somerae] diamond 171 86.3 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium somerae
30705605 30705605 PRJNA1255065_P_NODE_134054_length_165_cov_0.887931_g131826_i0 PRJNA1255065 134054 165 0.887931 1.46508615 Cetobacterium sp. 8H 2759681 Bacteria Bacteria 110 1.69e-26   NR WP_185875891.1 2759681 g131826 i0 96.3 3.92727272727273 54 2 98.2 0 2 163 214 267 WP_185875891.1 DEAD/DEAH box helicase [Cetobacterium sp. 8H] diamond 648 110 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. 8H
31464514 31464514 PRJNA1255065_P_NODE_111856_length_168_cov_0.873950_g109628_i0 PRJNA1255065 111856 168 0.87395 1.468236 Fusobacterium necrophorum 859 Bacteria Bacteria 44.3 7.56e-4   NR WP_147369864.1 859 g109628 i0 58.3 1.875 36 15 64.3 0 61 168 9 44 WP_147369864.1 hypothetical protein, partial [Fusobacterium necrophorum] diamond 315 44.3 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Fusobacterium necrophorum
31843729 31843729 PRJNA1255065_P_NODE_64077_length_234_cov_1.086486_g61849_i0 PRJNA1255065 64077 234 1.086486 2.54237724 uncultured Cetobacterium sp. 527638 Bacteria Bacteria 144 2.89e-40   NR WP_294096157.1 527638 g61849 i0 93.5 0.987179487179487 77 5 98.7 0 3 233 229 305 WP_294096157.1 hypothetical protein [uncultured Cetobacterium sp.] diamond 231 144 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium uncultured Cetobacterium sp.
31988222 31988222 PRJNA1255065_P_NODE_153438_length_162_cov_0.911504_g151210_i0 PRJNA1255065 153438 162 0.911504 1.47663648 Cetobacterium 180162 Bacteria Bacteria 86.7 5.78e-19   NR WP_052193983.1 1339239 g151210 i0 100 2 54 0 100 0 162 1 25 78 WP_052193983.1 outer membrane beta-barrel protein [Cetobacterium sp. ZOR0034] diamond 324 86.7 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. ZOR0034
32304998 32304998 PRJNA1255065_P_NODE_131999_length_165_cov_0.896552_g129771_i0 PRJNA1255065 131999 165 0.896552 1.4793108 root 1 Root_unresolved Root_unresolved 49.3 1.2e-5   NR WP_222702918.1 859 g129771 i0 67.6 5.58181818181818 34 11 61.8 0 40 141 72 105 WP_222702918.1 hypothetical protein [Fusobacterium necrophorum] diamond 921 49.3 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Fusobacterium necrophorum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;