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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA1253698" and tax_superkingdom = "Viruses"

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tax_phylum 2

tax_kingdom 2

tax_superkingdom 1

  • Viruses · 11 ✖

bioproject 1

  • PRJNA1253698 · 11 ✖

analysis 1

  • diamond · 11 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27200008 27200008 PRJNA1253698_S_NODE_7902_length_244_cov_1.558974_g7536_i0 PRJNA1253698 7902 244 1.558974 3.80389656 Hubei toti-like virus 2 1923308 Viruses Viruses 77.4 2.36e-14   NR YP_009336496.1 1923308 g7536 i0 48.8 2.98770491803279 82 41 99.6 1 2 244 586 667 YP_009336496.1 hypothetical protein 2 [Hubei toti-like virus 2] diamond 729 77.4 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Totivirus jyugo
27534075 27534075 PRJNA1253698_S_NODE_9983_length_218_cov_1.207101_g9617_i0 PRJNA1253698 9983 218 1.207101 2.63148018 Ghabrivirales 2732540 Viruses Viruses 102 1.92e-23   NR YP_009336496.1 1923308 g9617 i0 71.8 7.88532110091743 71 20 97.7 0 2 214 489 559 YP_009336496.1 hypothetical protein 2 [Hubei toti-like virus 2] diamond 1719 103 0.990291262135922 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Totivirus jyugo
27547736 27547736 PRJNA1253698_S_NODE_3984_length_349_cov_1.886667_g3618_i0 PRJNA1253698 3984 349 1.886667 6.58446783 Cynanchum associated totivirus 3161584 Viruses Viruses 177 2.38e-49   NR WZE63370.1 3161584 g3618 i0 73.3 0.997134670487106 116 30 99.7 1 2 349 359 473 WZE63370.1 putative RNA-directed RNA polymerase [Cynanchum associated totivirus] diamond 348 177 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Cynanchum associated totivirus
28621397 28621397 PRJNA1253698_S_NODE_1667_length_629_cov_1.774138_g1325_i0 PRJNA1253698 1667 629 1.774138 11.15932802 Cynanchum associated totivirus 3161584 Viruses Viruses 175 2.78e-47   NR WZE63369.1 3161584 g1325 i0 67.6 0.529411764705882 111 36 52.9 0 295 627 483 593 WZE63369.1 putative capsid protein [Cynanchum associated totivirus] diamond 333 175 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Cynanchum associated totivirus
28652873 28652873 PRJNA1253698_S_NODE_14027_length_187_cov_1.862319_g13661_i0 PRJNA1253698 14027 187 1.862319 3.48253653 Panax notoginseng virus A 1777016 Viruses Viruses 83.6 7.01e-17   NR YP_009225665.1 1777016 g13661 i0 60 3.85026737967914 60 24 96.3 0 3 182 64 123 YP_009225665.1 putative RNA-dependent RNA polymerase [Panax notoginseng virus A] diamond 720 83.6 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Totivirus jyushi
28652874 28652874 PRJNA1253698_S_NODE_5167_length_304_cov_1.764706_g4801_i0 PRJNA1253698 5167 304 1.764706 5.36470624 Cynanchum associated totivirus 3161584 Viruses Viruses 108 8.04e-25   NR WZE63370.1 3161584 g4801 i0 55.6 1.77631578947368 90 40 88.8 0 5 274 685 774 WZE63370.1 putative RNA-directed RNA polymerase [Cynanchum associated totivirus] diamond 540 108 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Cynanchum associated totivirus
29852738 29852738 PRJNA1253698_S_NODE_3671_length_364_cov_2.273016_g3305_i0 PRJNA1253698 3671 364 2.273016 8.27377824 Cynanchum associated totivirus 3161584 Viruses Viruses 183 3.13e-51   NR WZE63370.1 3161584 g3305 i0 77.1 2.69505494505495 109 25 89.8 0 364 38 258 366 WZE63370.1 putative RNA-directed RNA polymerase [Cynanchum associated totivirus] diamond 981 183 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Cynanchum associated totivirus
30059958 30059958 PRJNA1253698_S_NODE_1871_length_570_cov_2.019194_g1523_i0 PRJNA1253698 1871 570 2.019194 11.5094058 Totivirus 11007 Viruses Viruses 213 3.2e-61   NR AWX94599.1 2248770 g1523 i0 53.4 2.97894736842105 189 86 99.5 1 569 3 34 220 AWX94599.1 putative RNA-dependent RNA polymerase [Panax notoginseng virus B] diamond 1698 213 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Totivirus jyushi
31306052 31306052 PRJNA1253698_S_NODE_9375_length_225_cov_1.176136_g9009_i0 PRJNA1253698 9375 225 1.176136 2.646306 Siphoviridae sp. ctHip2 2827830 Viruses Viruses 60.8 1.15e-8   NR DAF42573.1 2827830 g9009 i0 50 1.68 62 31 82.7 0 38 223 10 71 DAF42573.1 MAG TPA: AAA-like domain protein [Siphoviridae sp. ctHip2] diamond 378 60.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Siphoviridae sp. ctHip2
32318762 32318762 PRJNA1253698_S_NODE_7979_length_243_cov_1.319588_g7613_i0 PRJNA1253698 7979 243 1.319588 3.20659884 Cynanchum associated totivirus 3161584 Viruses Viruses 110 7.11e-26   NR WZE63369.1 3161584 g7613 i0 62 0.975308641975309 79 30 97.5 0 238 2 178 256 WZE63369.1 putative capsid protein [Cynanchum associated totivirus] diamond 237 110 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Cynanchum associated totivirus
32791762 32791762 PRJNA1253698_S_NODE_7260_length_255_cov_1.470874_g6894_i0 PRJNA1253698 7260 255 1.470874 3.7507287 Carrot-associated toti-like virus 3051703 Viruses Viruses 84.3 9.8e-17   NR WIL96218.1 3051703 g6894 i0 53.7 0.788235294117647 67 31 78.8 0 208 8 34 100 WIL96218.1 RNA-dependent RNA polymerase [Carrot-associated toti-like virus] diamond 201 84.3 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Carrot-associated toti-like virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;