RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1253698" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1253698 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29189756 29189756 PRJNA1253698_S_NODE_20849_length_165_cov_0.896552_g20483_i0 PRJNA1253698 20849 165 0.896552 1.4793108 Chloroflexota bacterium 2026724 Bacteria Bacteria 76.6 1.29e-14   NR MDQ3443140.1 2026724 g20483 i0 63 0.981818181818182 54 20 98.2 0 163 2 234 287 MDQ3443140.1 alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [Chloroflexota bacterium] diamond 162 76.6 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
29599815 29599815 PRJNA1253698_S_NODE_21710_length_164_cov_0.904348_g21344_i0 PRJNA1253698 21710 164 0.904348 1.48313072 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 61.2 3.59e-9   NR CAA9375203.1 1672391 g21344 i0 54.9 0.932926829268293 51 23 93.3 0 4 156 258 308 CAA9375203.1 MAG: hypothetical protein AVDCRST_MAG93-8762, partial [uncultured Chloroflexia bacterium] diamond 153 61.2 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;