RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1253698" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1253698 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28810356 28810356 PRJNA1253698_S_NODE_11028_length_208_cov_1.289308_g10662_i0 PRJNA1253698 11028 208 1.289308 2.68176064 Penicillium daleae 63821 Fungi Fungi 52.4 9.27e-6   NR KAJ5465358.1 63821 g10662 i0 52.8 2.29326923076923 53 25 76.4 0 35 193 324 376 KAJ5465358.1 hypothetical protein N7458_001044 [Penicillium daleae] diamond 477 52.4 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Penicillium Penicillium daleae
28968657 28968657 PRJNA1253698_S_NODE_20888_length_165_cov_0.896552_g20522_i0 PRJNA1253698 20888 165 0.896552 1.4793108 Aspergillus carbonarius ITEM 5 40993 Fungi Fungi 84 3.79e-17   NR OOF98427.1 602072 g20522 i0 74.5 1.87272727272727 51 13 92.7 0 161 9 131 181 OOF98427.1 hypothetical protein ASPCADRAFT_513932 [Aspergillus carbonarius ITEM 5010] diamond 309 84 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus carbonarius
30516127 30516127 PRJNA1253698_S_NODE_6153_length_277_cov_1.320175_g5787_i0 PRJNA1253698 6153 277 1.320175 3.65688475 Thermothelomyces hinnuleus 225406 Fungi Fungi 43.9 0.0214   NR KAL2166151.1 225406 g5787 i0 33.8 0.833935018050541 77 42 73.6 3 48 251 90 166 KAL2166151.1 hypothetical protein VTG60DRAFT_3248 [Thermothelomyces hinnuleus] diamond 231 43.9 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Sordariales Chaetomiaceae Thermothelomyces Thermothelomyces hinnuleus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;