contig_metadata
9 rows where analysis = "diamond", bioproject = "PRJNA1253303" and tax_superkingdom = "Viruses"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18211119 | 18211119 | PRJNA1253303_P_NODE_2355_length_341_cov_0.873134_g2333_i0 | PRJNA1253303 | 2355 | 341 | 0.873134 | 2.97738694 | Murine astrovirus 2 | 2171380 | Viruses | Viruses | 217 | 8.46e-64 | NR | QFP20151.1 | 2171380 | g2333 | i0 | 86.7 | 0.994134897360704 | 113 | 15 | 99.4 | 0 | 3 | 341 | 492 | 604 | QFP20151.1 capsid protein [Murine astrovirus 2] | diamond | 339 | 217 | 1 | Viruses | Orthornavirae | Pisuviricota | Stelpaviricetes | Stellavirales | Astroviridae | Murine astrovirus 2 | |||
| 27231809 | 27231809 | PRJNA1253303_P_NODE_7943_length_244_cov_0.912281_g7921_i0 | PRJNA1253303 | 7943 | 244 | 0.912281 | 2.22596564 | Caudoviricetes sp. | 2832643 | Viruses | Viruses | 138 | 2.17e-36 | NR | DAL27657.1 | 2832643 | g7921 | i0 | 85.7 | 0.94672131147541 | 77 | 11 | 94.7 | 0 | 9 | 239 | 189 | 265 | DAL27657.1 MAG TPA_asm: carboxylesterase family protein [Caudoviricetes sp.] | diamond | 231 | 138 | 1 | Viruses | Heunggongvirae | Uroviricota | Caudoviricetes | Caudoviricetes sp. | |||||
| 28052863 | 28052863 | PRJNA1253303_P_NODE_6645_length_248_cov_0.891429_g6623_i0 | PRJNA1253303 | 6645 | 248 | 0.891429 | 2.21074392 | Carya illinoinensis carlavirus 1 | 2794420 | Viruses | Viruses | 124 | 5.959999999999999e-31 | NR | QQG34672.1 | 2794420 | g6623 | i0 | 74.4 | 0.991935483870968 | 82 | 21 | 99.2 | 0 | 246 | 1 | 893 | 974 | QQG34672.1 RdRp [Carya illinoinensis carlavirus 1] | diamond | 246 | 124 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Carlavirus | Carya illinoinensis carlavirus 1 | ||
| 30421728 | 30421728 | PRJNA1253303_P_NODE_6833_length_247_cov_0.896552_g6811_i0 | PRJNA1253303 | 6833 | 247 | 0.896552 | 2.21448344 | Prochlorococcus phage P-SSM7 | 445688 | Viruses | Viruses | 64.7 | 1.55e-11 | NR | YP_004324882.1 | 445688 | g6811 | i0 | 68.4 | 0.923076923076923 | 38 | 12 | 46.2 | 0 | 119 | 6 | 1 | 38 | YP_004324882.1 hypothetical protein PSSM7_051 [Prochlorococcus phage P-SSM7] | diamond | 228 | 64.7 | 1 | Viruses | Heunggongvirae | Uroviricota | Caudoviricetes | Pantevenvirales | Kyanoviridae | Palaemonvirus | Palaemonvirus pssm7 | ||
| 30642369 | 30642369 | PRJNA1253303_P_NODE_2113_length_358_cov_1.164912_g2091_i0 | PRJNA1253303 | 2113 | 358 | 1.164912 | 4.17038496 | Chrysanthemum yellow edge associated virus 2 | 3025447 | Viruses | Viruses | 77 | 1.23e-13 | NR | WCL16046.1 | 3025447 | g2091 | i0 | 46.5 | 0.720670391061452 | 86 | 45 | 71.2 | 1 | 1 | 255 | 351 | 436 | WCL16046.1 inclusion body protein [Chrysanthemum yellow edge associated virus 2] | diamond | 258 | 77 | 1 | Viruses | Chrysanthemum yellow edge associated virus 2 | ||||||||
| 31577187 | 31577187 | PRJNA1253303_P_NODE_6996_length_247_cov_0.896552_g6974_i0 | PRJNA1253303 | 6996 | 247 | 0.896552 | 2.21448344 | root | 1 | Root_unresolved | Root_unresolved | 51.6 | 1.27e-5 | NR | BAR18313.1 | 1407671 | g6974 | i0 | 43.1 | 2.61133603238866 | 72 | 36 | 87.4 | 1 | 6 | 221 | 39 | 105 | BAR18313.1 hypothetical protein [uncultured Mediterranean phage uvMED] | diamond | 645 | 52 | 0.992307692307692 | Viruses | Heunggongvirae | Uroviricota | Caudoviricetes | uncultured Mediterranean phage uvMED | |||||
| 31924946 | 31924946 | PRJNA1253303_P_NODE_3797_length_283_cov_1.328571_g3775_i0 | PRJNA1253303 | 3797 | 283 | 1.328571 | 3.75985593 | Marchewkavirus | 3425052 | Viruses | Viruses | 150 | 3.66e-44 | NR | USN14802.1 | 2948598 | g3775 | i0 | 68.1 | 1.99293286219081 | 94 | 30 | 99.6 | 0 | 2 | 283 | 55 | 148 | USN14802.1 hypothetical protein DOMOVOI_03280 [Brevundimonas phage vB_BpoS-Domovoi] | diamond | 564 | 150 | 1 | Viruses | Heunggongvirae | Uroviricota | Caudoviricetes | Jeanschmidtviridae | Marchewkavirus | Marchewkavirus domovoi | |||
| 31938599 | 31938599 | PRJNA1253303_P_NODE_6517_length_248_cov_0.891429_g6495_i0 | PRJNA1253303 | 6517 | 248 | 0.891429 | 2.21074392 | uncultured marine virus | 186617 | Viruses | Viruses | 107 | 8.2e-28 | NR | BCV08434.1 | 186617 | g6495 | i0 | 87 | 0.653225806451613 | 54 | 6 | 65.3 | 1 | 3 | 164 | 66 | 118 | BCV08434.1 MAG: hypothetical protein CM15mL5_2090 [uncultured marine virus] | diamond | 162 | 107 | 1 | Viruses | uncultured marine virus | ||||||||
| 32665913 | 32665913 | PRJNA1253303_P_NODE_6720_length_247_cov_1.574713_g6698_i0 | PRJNA1253303 | 6720 | 247 | 1.574713 | 3.88954111 | Fish-associated picorna-like virus 3 | 3003959 | Viruses | Viruses | 65.5 | 4e-10 | NR | XCM67999.1 | 3003959 | g6698 | i0 | 45.3 | 0.910931174089069 | 75 | 37 | 91.1 | 1 | 246 | 22 | 2364 | 2434 | XCM67999.1 MAG: polyprotein [Picornavirales sp.] | diamond | 225 | 65.5 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Fish-associated picorna-like virus 3 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;