RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA1253303" and tax_phylum = "Uroviricota"

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tax_superkingdom 1

tax_phylum 1

  • Uroviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1253303 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27231809 27231809 PRJNA1253303_P_NODE_7943_length_244_cov_0.912281_g7921_i0 PRJNA1253303 7943 244 0.912281 2.22596564 Caudoviricetes sp. 2832643 Viruses Viruses 138 2.17e-36   NR DAL27657.1 2832643 g7921 i0 85.7 0.94672131147541 77 11 94.7 0 9 239 189 265 DAL27657.1 MAG TPA_asm: carboxylesterase family protein [Caudoviricetes sp.] diamond 231 138 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
30421728 30421728 PRJNA1253303_P_NODE_6833_length_247_cov_0.896552_g6811_i0 PRJNA1253303 6833 247 0.896552 2.21448344 Prochlorococcus phage P-SSM7 445688 Viruses Viruses 64.7 1.55e-11   NR YP_004324882.1 445688 g6811 i0 68.4 0.923076923076923 38 12 46.2 0 119 6 1 38 YP_004324882.1 hypothetical protein PSSM7_051 [Prochlorococcus phage P-SSM7] diamond 228 64.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes Pantevenvirales Kyanoviridae Palaemonvirus Palaemonvirus pssm7
31577187 31577187 PRJNA1253303_P_NODE_6996_length_247_cov_0.896552_g6974_i0 PRJNA1253303 6996 247 0.896552 2.21448344 root 1 Root_unresolved Root_unresolved 51.6 1.27e-5   NR BAR18313.1 1407671 g6974 i0 43.1 2.61133603238866 72 36 87.4 1 6 221 39 105 BAR18313.1 hypothetical protein [uncultured Mediterranean phage uvMED] diamond 645 52 0.992307692307692 Viruses   Heunggongvirae Uroviricota Caudoviricetes       uncultured Mediterranean phage uvMED
31924946 31924946 PRJNA1253303_P_NODE_3797_length_283_cov_1.328571_g3775_i0 PRJNA1253303 3797 283 1.328571 3.75985593 Marchewkavirus 3425052 Viruses Viruses 150 3.66e-44   NR USN14802.1 2948598 g3775 i0 68.1 1.99293286219081 94 30 99.6 0 2 283 55 148 USN14802.1 hypothetical protein DOMOVOI_03280 [Brevundimonas phage vB_BpoS-Domovoi] diamond 564 150 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Jeanschmidtviridae Marchewkavirus Marchewkavirus domovoi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;