RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1253303" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 3 ✖

bioproject 1

  • PRJNA1253303 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28796812 28796812 PRJNA1253303_P_NODE_6227_length_249_cov_0.886364_g6205_i0 PRJNA1253303 6227 249 0.886364 2.20704636 Cyanobacteriota/Melainabacteria group 1798711 Bacteria Bacteria 70.1 7.33e-12   NR WP_190490210.1 2692827 g6205 i0 45.2 6.18072289156626 73 40 88 0 247 29 157 229 WP_190490210.1 vWA domain-containing protein [Microcoleus sp. FACHB-831] diamond 1539 70.1 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Oscillatoriales Microcoleaceae Microcoleus Microcoleus sp. FACHB-831
30105298 30105298 PRJNA1253303_P_NODE_5712_length_251_cov_0.876404_g5690_i0 PRJNA1253303 5712 251 0.876404 2.19977404 Nostoc sp. TCL24 1180 Bacteria Bacteria 77 3.51e-14   NR WP_174708685.1 2572090 g5690 i0 47.4 1.81673306772908 78 41 93.2 0 9 242 557 634 WP_174708685.1 tetratricopeptide repeat protein [Nostoc sp. TCL240-02] diamond 456 77 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Nostocaceae Nostoc Nostoc sp. TCL240-02
30642372 30642372 PRJNA1253303_P_NODE_7233_length_246_cov_0.901734_g7211_i0 PRJNA1253303 7233 246 0.901734 2.21826564 uncultured Leptolyngbya sp. 332963 Bacteria Bacteria 179 3.929999999999999e-52   NR CAA9415466.1 332963 g7211 i0 100 1 82 0 100 0 246 1 54 135 CAA9415466.1 hypothetical protein AVDCRST_MAG94-6667, partial [uncultured Leptolyngbya sp.] diamond 246 179 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Leptolyngbyales Leptolyngbyaceae Leptolyngbya uncultured Leptolyngbya sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;